Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018311G001
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Entry
GSTEN00018311G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08133
collagen type XIV alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tng00535
]
GSTEN00018311G001
Proteoglycans [BR:
tng00535
]
Extracellular matrix (ECM) proteoglycans
Others
GSTEN00018311G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Interfer-bind
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
CAG00019
UniProt:
Q4SH63
LinkDB
All DBs
Position
8
AA seq
1557 aa
AA seq
DB search
CRTEAIADIVILVDGSWSIGRLNFRLVRMFLENLVNAFDVGIDKTRIGGALLLSLMLLYY
LCNFSFPGMFMFFVHLKFLYVCVFLGLAQYSGDPRIEWHLNAYSTKDAVIDAVRNLPYKG
GNTLTGLALNFILENCFKPESGSREGLPKIGILITDGKSQDDVVPPAESLRNAGIELFAI
GVKNADENELQSIASPPEDTHVYNVADFSVMNSIVEALTRTVCEQVVQQDKEIKQISEHV
PETVGAPHELVTSEVTARNFRVSWSPAPGNVEKYRVVYYAARGEEPHEAVVDGSETSVVL
DHLSSLTEYQLAVFAVYATEASEALRGSETTLALPSVTGLQLLDVTHSTMKVTWDRVEGA
SGYLLLYGPLIEDGQLNEKELKLSNAVTELELQALNPHTEYTVTVYAMYGDETSDPMTTQ
ETTLPLNPPSNLQFSDITHKSAHISWDSAFPAAKGYRIVWVKTDGLVMEELIVGNVNSYD
LSNLMSLTEYSVAVSAVYDEGQSEPLTDGFTTTPVPGPLNLRSTNVSSDSFQVIWDHSAN
DIVLYRLSWAPFTGGDTKEVVLSGSNNRYVLTGLNPSTEYEVLLTAVFRDESESDTISVI
ETTFVRQAVRNLQLTDETTESLKASWEMNDPYVESYRISYFGNNHKEESVIPGGQRRAVL
PSLLSDTQYKVTVTPVYVDGQDGISASAFSATLPLLSPGNLRVSEEWYTRFKVTWDPPQS
PVLGYRIVYQPVYVPEPLLETTVNEDVNSMVLLNLLPGTEYNVQLTASYPMGESEPLLKT
AKTCRCHYTTLMLLLYKTFTDCVFSLWGKNGQKQEVTLGGGASRQCFYDLTPSSQYQISV
CTQMQETEGPSVSITDMTLPAPTQAPTEAPTTEPPPTIPPPKEVCKEAKADLVFLVDGSW
SIGDENFMKITRFLHSTVGSLDLIGTDGTQVAIAQFSDDARTEFQLSSHSNKEALLEAIQ
KISYKGGNTKTGRAIKHVKESIFSLEAGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMDG
YIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVL
MSGNTIAGFRMMDKFGLVEKEYSTIPGVSLEPGSFNSFPSYRLHRDALVSQPTKYLHPEP
LPSDYTISIMLRLLPETPQEPFALWEILNKRNEPLVGLILDNSGKTLTFFNHDFKGEFQT
VTFEGNEIKKLFHGSFHKLHVTISKTSVKAVLDCSAVGEKSVYAAGNITTDGVEILGRMV
RSRGRRDSSAPFQLQMFDIICSTSWARRDKCCELPALRVEAQCPPLPHACTCSQDSKGPP
GPSGPPGGPGTRGARGDRGEPGLTGPQGPVGDRGSAGPPGPPGPQGPSGLSIQGPPGIAG
EKGERGANGPPGQMGLPGGPGTPGRDGPPGIRGLPGNIGPQGRQGPPGPLGAPGAPGVPG
PSGSAGSPGDQGIPGPAGAKGDKGERGDVQSQAAVRAIARQVCEQLIQSHLSRYNSILNQ
IPVQSSASVRTVPGPPGEPGRTGPPGPPGEQGPTGRPGFPGTNGQSGRPGERGEGGR
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
tgccgcacggaggccattgcagacatcgtgatcttggtggacggatcctggagtatcggc
cgactcaacttccgcttggtccgcatgttcctggaaaaccttgtaaatgcctttgatgtt
ggcattgataaaacaagaataggtggggccctgctactttccctcatgcttctttattat
ttatgtaactttagtttccctggtatgttcatgtttttcgtgcatctgaagtttttgtat
gtttgtgtgtttctaggcctggctcagtacagtggtgatcccaggattgagtggcatcta
aacgcctattccactaaagatgccgtcatcgatgctgtcaggaacctgccttacaaaggt
ggaaacactctcacaggactggctttaaactttatcttggagaactgtttcaagccggaa
tctggctcccgggaggggttacccaagattgggatcctcatcactgacgggaagtctcag
gatgatgtcgtaccaccagccgaaagcctgcgaaatgctggcattgagctgtttgctatt
ggtgtaaagaatgcagatgaaaacgagttgcagtccatcgcctctccccccgaagatact
cacgtctataatgtggctgatttcagtgtcatgaattcaatagtggaggcactgaccaga
acagtgtgtgaacaagtggtgcagcaagacaaggagataaagcagatatcagaacacgtg
ccagaaactgtcggggcgccacacgaactggtgacctcagaagtgacggcgcgaaacttt
cgggtttcatggagccccgcccctggaaacgtggagaaatacagagtggtttattacgct
gctcgcggagaagaaccacatgaggcggtcgtggatggtagtgagacatcggtggtgtta
gaccatctcagctctctgaccgagtaccagctggctgtgtttgctgtctatgcaactgaa
gcaagcgaagctctgagaggatcagaaacaacattggctcttccctctgtcacgggcctc
cagttgctcgatgtgactcacagcaccatgaaggtaacatgggaccgtgttgaaggagcc
tctggctacctgctgctgtatggaccactcatagaagacggacaactgaatgaaaaggag
ctcaagttatctaatgccgtgactgagctggaacttcaagctttgaatcctcataccgaa
tacactgtcactgtttatgccatgtatggagatgaaaccagcgacccaatgacaacccag
gaaactacattgccgctgaatcctcccagcaacctccagttctcagacatcactcacaaa
tctgcccacattagctgggactctgcattcccagcagccaaagggtaccgcatcgtgtgg
gtcaagacagacgggctagtcatggaagagctgattgttggaaatgtaaactcctatgac
ctcagcaatttgatgtctttgacggagtattcggtggccgtctctgctgtgtatgacgaa
ggccagtcggagcctctgacggatggattcacaaccactccagttcctggccctttgaac
ctgcgatccaccaatgtcagcagtgacagcttccaggtcatttgggaccactcggccaat
gacatcgtcctctacagactgtcatgggcgccgttcacaggtggtgacacaaaggaggtc
gtcttaagtggaagtaataacagatacgtccttactggcctgaatccttcgactgagtat
gaagtcctgttgacagctgtcttccgagatgaatctgagagcgacaccatctctgtcatt
gagacaacatttgtgcgtcaggctgtgaggaaccttcagctgactgacgagaccactgag
agcttgaaggcttcatgggagatgaacgacccctacgtggagagctacaggatttcttat
tttggcaataaccataaagaggagtctgtgattccaggtggtcagaggagggcagtgctt
ccatcgttactgtcagacactcagtacaaagtgacagtcacgccggtgtacgtggatgga
caggacggcatcagtgcctcagctttcagcgccacgttgccgcttttgtctcctggaaat
ctccgcgtctcagaggagtggtacacccgcttcaaggttacctgggacccaccccagtct
cctgtactgggttacaggattgtctaccagcccgtctatgttccggagccactgttggag
acaacggtgaatgaagacgtcaactctatggtccttttgaacctgctacctgggacagag
tacaatgtccagttgacagcatcctatcctatgggagaaagtgaaccgctgctgaagact
gccaagacatgtaggtgtcattatacgaccttaatgttattattgtacaaaacttttact
gattgtgttttttccttgtggggaaaaaatggccaaaagcaggaagtgaccctgggaggc
ggtgcctccaggcagtgcttttatgacctcacacccagcagccaataccagatcagcgtt
tgcacgcagatgcaagaaacagagggaccctctgtctccatcactgacatgacattgccg
gctcccactcaagctcctaccgaagcacccaccacggagccccctcccaccatcccacct
cctaaggaagtgtgtaaagaggccaaagctgacctggtgttccttgtcgatggatcctgg
tccatcggcgatgaaaatttcatgaagatcacccgttttcttcacagcaccgtgggttcg
cttgacctgattggaacagatggaacccaggtggccatcgcacagttcagcgatgatgct
cgaacagaattccaattgagttcccatagcaacaaggaagctctgctggaggcgattcag
aagatcagctacaaaggaggaaacaccaagacaggtcgagccatcaagcacgtaaaggag
tctatattctccttggaggctggcgcgagacgaggcgtgcccaaagtcctggtcgttctc
acggatggacgttcgcaagatgatgtaaacaaggtgtccaaggagatgcagatggatggc
tacatcatatttgccatcggctttgcggatgcagactatggagagcttgtgaatattgcc
agcaaacccagtgacaggcatgtcttttttgtggatgatttggatgctgtgaagaaaata
gaggagcagctcattacttttgtctgcgaggctgcaactgccacttgcccatctgtgttg
atgagtggaaacacaatagcaggttttcggatgatggacaaatttggtcttgttgagaag
gagtacagcaccatacctggagtttctctggagccgggatctttcaacagcttcccatct
tacagattacaccgtgacgcactggtgtcgcagcctacaaagtacctgcatcctgaacct
ttaccatcagactacaccatctctataatgctccgcctacttcccgagacgccacaggaa
ccttttgcactgtgggaaatcctcaacaaacgtaatgagccactggttggactgatcctg
gacaactctggaaaaacattgacgttctttaaccacgattttaaaggagagttccagact
gtcacgtttgaagggaatgaaatcaaaaaactcttccatggcagcttccacaagctccat
gttaccatcagcaagacatctgtgaaggctgtgctggactgctctgccgttggcgagaaa
tctgtttacgctgctggaaacatcaccacggacggagtggagatcctggggaggatggtt
cggtccaggggaagacgggacagctctgctccattccagctccagatgtttgacatcatc
tgcagcacatcctgggccaggagagacaagtgttgtgagctgccagcactgagagttgaa
gcgcagtgtcctcccttaccccatgcttgtacctgctcccaggacagcaaaggacctcca
ggaccgtctggaccaccaggaggcccgggaacgaggggagccagaggagacaggggagag
ccaggattgacggggcctcaagggccagtaggggacaggggttcagcagggcccccagga
ccacctggaccccagggacccagtggtctctctattcagggtcccccgggtatcgctgga
gagaaaggagagagaggggcaaacggtccacctggacaaatgggtctgcctggaggccca
ggtacccctgggcgagatggccccccaggcattaggggtcttccaggtaacattggtccc
cagggacggcagggacctcctggaccacttggagcaccaggggccccaggagtgccgggg
cctagtgggtcagcagggtctccaggagaccaagggattccaggtcctgctggcgccaaa
ggagataagggagagagaggtgatgtgcagtcccaggctgctgtgcgcgccatcgcacgg
caggtgtgtgaacagcttatccagagccacttgtctcgctacaactccatattgaaccag
atccccgttcagtcctcggcatcggtccgaacagtacccggacctcccggtgagccaggt
cggaccggtcctccgggacccccgggggagcaaggccccactggcaggcccggttttccc
ggcaccaatggccagagcggacgaccgggagagagaggtgagggtgggcgctga
DBGET
integrated database retrieval system
