Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018314G001
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Entry
GSTEN00018314G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16682
LIM domain-containing protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
GSTEN00018314G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00018314G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00018314G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
GSTEN00018314G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
GSTEN00018314G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-ProteinID:
CAG00021
LinkDB
All DBs
Position
8
AA seq
586 aa
AA seq
DB search
MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRRDVGNNPDFEETRKVFASKMTKIHMQKH
QEEMARNSQGMKMNGGHNSAHHAKDRPPINSSRAAGEAAAKPPLLSGPAPGAAAAQPCAP
FDGQKHHTGAQSELPTGRAYGYGNNYDNKESSEPHAYQHTTHTSSSPGSASHSAPTYARH
PSSQPAVWAPASESQISTAGSGSSGASQPPRQPTPPSTHGVPPQPFQTGASSGNWTLPSS
SRGLSQEPAGPSKPDLIPPLPLSAFIGEADLHLQQPAKQASAPYTSQSSRPGFTPNGSTP
VSPFSSPPTDASQHQAQKASPASEPSSIGRDGSQIQSKSQVAEADALCSSKPAQPFCQPL
LTQPQEPGFSAAEIKLEVSLNGWKKRWMRNRRLTTLLQASVGVWDEFIGEPVLSAAKRSM
EPTRPVRQWVICTTTVASPAAPAYSGFQQSADKCNACGHLIMDMILQALGKSYHPGCFRC
VICNESLDGVPFTVDTENKIYCLKDYHRVLAPKCAACKQPILPSEGSDETIRVVSMDKDY
HVDCYRCEECRIELNDEEGHRCYPLNSHLLCHSCHLKNIQGCASSS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggacctgggactcgaggcgagcaagtttatcgaggacttaaacatg
tacgaagcatcaagagacgggctgtttcgcaccaggagggatgtaggaaataaccccgac
tttgaagagacgaggaaagtttttgcctccaaaatgactaaaatccacatgcagaaacac
caggaggaaatggcaagaaacagccaggggatgaaaatgaatggtggccataacagcgcc
catcacgccaaagaccgcccgcctataaatagcagccgagcggcgggggaggcggcggcc
aagcccccgctgctctccggccccgcgccgggcgccgcggctgcgcagccctgcgccccg
ttcgacggccagaagcaccacacaggcgcgcagtctgaactcccaacaggaagggcatat
ggctacggaaacaattacgataataaggagagttcggagccacatgcataccagcacacc
acccatacttcctccagcccaggaagcgcgtctcacagcgcgcccacatatgctcgtcac
cccagcagccagcctgcggtttgggccccggccagtgagagccagatttccacagctggg
tctgggagcagcggcgcgtctcagcctccacgccagcctacgccgcccagcacccacggc
gtcccaccccagcccttccagacgggcgcctcctctgggaactggaccttgccttcttct
tccaggggactgtcgcaggagcccgccggcccctccaaaccggacctcatcccacccttg
cctttaagtgccttcataggagaagccgacttgcacttgcagcagcccgccaagcaggcc
tcagccccttacacctcccagtcctcccgacccggcttcaccccgaacggttccacaccc
gtgtccccgttttcatctccacccactgacgcgtcccagcatcaggcccagaaggcgtct
ccggcctcagagcccagcagcatcggcagagatggcagccagattcagtctaagagccag
gtcgctgaggcagatgccctgtgctcctcaaagcctgcccagccattttgtcagcctctc
ctcacgcagccgcaggagccgggcttttcagcagccgaaatcaaattagaggtatcgcta
aacggctggaaaaagagatggatgcgcaaccgaaggctgactactttgctgcaagcgtct
gttggggtgtgggatgagttcataggggaacctgtgctaagtgcagcaaagaggtctatg
gagccaaccaggcctgtcaggcaatgggtaatctgtaccacgacagttgcttcacctgca
gcgcctgcatactccggtttccagcagtctgcagacaagtgcaatgcctgtggacatctg
atcatggacatgatcctccaagccctggggaagtcctaccacccaggctgcttccgctgt
gtcatctgtaacgagagccttgacggagtgcccttcaccgtggacacggaaaacaagatc
tactgcctcaaagattaccaccgggtccttgcaccgaaatgcgcagcctgcaaacagccc
atcctgccatcagagggctcagatgaaacaatcagggttgtatccatggataaagactac
cacgtggactgctaccgctgcgaggaatgcaggatcgagttgaacgatgaggagggtcac
cgctgctatcctctgaacagccaccttctctgccactcctgccacctcaaaaacatccag
ggctgcgcctcttccagc
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