Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018478G001
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Entry
GSTEN00018478G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GSTEN00018478G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00018478G001
Spliceosome [BR:
tng03041
]
Common components
Common spliceosomal components
hnRNP proteins
GSTEN00018478G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
AAA_22
CPT
AAA
AAA_18
AAA_14
ATPase_2
KTI12
cobW
Motif
Other DBs
NCBI-ProteinID:
CAG00140
UniProt:
Q4SGU2
LinkDB
All DBs
Position
14
AA seq
845 aa
AA seq
DB search
MSSIDVKKLKVNELKDELKKRNLLDKGVKAQLMDRLQAALDEEAMASRLDEEAAEDDAFE
QPADQEVMGEDEEEEGPVEESMEANEAEEEEEPDNGGAGAGVDEEMGEGEENVEEDDEMD
PMLKADVDDMEKIDADDGEPGDQAAEGKSAGSTSFYIFVLFFKGDADKDTNADQKNKKGV
KRRREEHGRGYYEFIEENKYSCFDIPNINARMGHMTPTREASLFVCPSHSYLSHVFSGGC
EGSSFKSPVPPLEEEDEEIDDTKVCLDAYNCDLHFKVSRDRYSASSLTMESFAYLWSGGK
ATYGVNKGKACFEMKITEKIPVKHISNKNTDIHDVQVGWSLATGTLLLGEEEFSFAYSSK
GKKTTKCVTEEFGETFEENDVVCCLIDCDGDEVVMSYCKNGGEPATAFRISKDGLDGQAL
FPHIICHNCAVEFNFGQMETPYFPQPEGFTFLQQIPVDDRVRGPRGPQTKADCEIIVMVG
LPGSGKTTWVKNHVQEHPGKYYILSSDTIVDKMMINSLKRQSKDITKLTTISQRAPLFLG
KFIEIAARKKRNYILDHVGGGCSGRGRVCLFAGFQRKAVVVCPSEEDYKQRVQQKVETDG
KEVPEHAILKMKGFYALPEEGDSFGEVLYAELQKEEASKLLEQYREESKTALPAEKKPNQ
GSTMPKRGGGQRGGGRGGKNQFGRGAGPGHRGGGRGGFQNRGNYRGRGGPMRGNMGPRGG
HMNRGGPGHRGNMNRGGGGGGGQMNRGGHRGHPGHVSLSRPAQPGTSIGAPLTCFTSVSA
VQPERRQPGQLWQQERQLQQPEQRQLWRQQERHGQGPGFQPELAAGVLEPEALESAVPAR
ILLRL
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagctccattgacgttaaaaagctgaaagttaacgagctgaaggatgagctgaagaag
cggaatctgctggacaagggggtgaaggcccagctgatggaccgcctgcaggccgcgctg
gacgaggaggccatggcctcgcgtctggacgaggaggcagcggaggacgatgccttcgag
cagcccgccgatcaagaggttatgggggaggacgaagaagaggaaggcccggtggaagag
agcatggaagccaacgaggcggaggaggaagaagagccggataatggaggcgccggtgct
ggcgttgacgaggagatgggtgagggggaggaaaacgtcgaggaggacgacgaaatggac
ccgatgctcaaggcggacgtggacgacatggaaaaaatagacgcagacgatggtgagccc
ggggatcaggctgctgagggtaagtcggcggggagcacctcattctatatctttgttcta
tttttcaaaggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgtt
aagagacgccgggaggaacatggaaggggctactatgaatttattgaagaaaacaaatac
agctgttttgacatcccaaatattaacgcgaggatgggtcacatgacaccaaccagggaa
gcgtctctctttgtgtgtccctcacactcgtacctttctcacgttttctccggaggctgc
gagggatcctccttcaaaagtcccgtcccaccgctggaggaggaagacgaggaaattgat
gacacgaaagtttgcctggatgcatacaactgcgacctgcactttaaggtgtcccgggat
cgctacagcgcctcgtctctgaccatggagagcttcgcctacctgtggtctggaggcaag
gccacctacggagtcaacaaaggcaaagcctgcttcgagatgaagattacagagaagatt
cctgtgaagcacatttccaacaagaacacggacatccatgacgtccaggtcggctggtcc
ctggctactggcacgctgctcctgggcgaggaggagttctcctttgcgtactccagcaaa
ggcaaaaagacgaccaagtgtgtgacggaggagtttggggagacctttgaggagaacgac
gtcgtctgctgcctgattgactgcgacggtgacgaggtggtgatgtcctactgcaagaac
ggcggcgagccggccacggcgttccggatcagcaaggacggcctggacggccaggccctc
ttcccccacatcatctgccacaactgcgccgtggagttcaacttcggtcagatggagact
ccgtactttcctcagcctgaaggcttcaccttcctgcagcagatccccgtggacgacaga
gtgcgtgggccccggggcccccagaccaaggccgactgtgagatcatagtcatggtgggt
ctgccgggctcggggaagaccacgtgggtcaagaatcacgtgcaggagcaccctgggaaa
tactacatcctcagtagcgacaccatcgtggacaagatgatgatcaacagcctgaagcgg
cagtccaaagacatcaccaagctgaccaccatctcccagcgagctccgctcttcctgggc
aagttcatcgagatcgctgcccgaaagaagaggaactacatcctggatcacgtaggtgga
ggttgttctggaagaggaagagtgtgcctgttcgccggcttccagcgcaaagctgtggtg
gtgtgtccgtctgaggaggactacaagcagagggtgcagcagaaggtggagaccgatggc
aaagaagtgcccgagcacgccatcctcaagatgaaagggttctacgctctccctgaggag
ggcgacagcttcggggaggtgctctacgccgagctgcagaaggaggaggcctccaagctg
ctggagcagtacagggaggagagcaagacggctctgccggccgagaagaagcccaaccag
ggcagcaccatgcccaagagaggcggcggccagcgcggaggaggccgcgggggcaagaac
cagtttggacgaggggctggccccggacaccgaggagggggccgcgggggcttccagaac
aggggcaactacagggggaggggcggccccatgaggggcaacatgggaccccgagggggc
cacatgaacagaggcggaccggggcatcggggcaacatgaaccgaggcggcggcggcggc
ggcggccagatgaaccgtggaggacacaggggccaccccggccacgtgagtctcagccgc
cccgcccagcctggaacctccatcggcgcaccgctaacctgcttcacgtctgtctccgca
gtacaaccagagaggcggcaaccggggcaactttggcaacaagaacggcaacttcaacaa
ccggaacagcggcaactttggcggcaacaggaacggcatggacaaggcccaggctttcaa
ccagagctggcagcaggggttctggagccagaagccctggaatcagcagtaccagcccgg
atattactgagactctag
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