Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018672G001
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Entry
GSTEN00018672G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00018672G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTEN00018672G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
GSTEN00018672G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAG00282
UniProt:
Q4SGF0
LinkDB
All DBs
Position
17
AA seq
497 aa
AA seq
DB search
IDWDTIRRQKDKFAELKWAGLPPLEKHFYVEAESVSLLTPEDVSEWRRVQHPKKNNNIFV
DDLKEEGEKRPIPKPCRTFLEAFERYPEIMDNIRRVGFDKPTPIQSQAWPVLMSGEDLIA
IAQTGTGKTLAYLLPGFIHMDGQPVPRSKRNGPAMLVLTPTRELALQIEAESKKYRFLDY
TSVCIYGGGDRNGQIAKVQSGVDIVIATPGRLNDLQMNELIHLRSVTYLVRVSIGFPEVL
DEADRMLDMGFEPQIMKILLDVRPDRQTVMTSATWPTAVRRLAKSYLRDPMIVYVGTLDL
AAVNTVEQKILIVNEEEKKFYMFDFIRDMEPLDKVLIFVGRKILVDDLSSDMCLQGISVQ
SLHGDREQCDREEALREFREGKVRILVATDLASRGLDVLDITHVFNYDFPRNIEEYVHRV
GRTGRAGWVFFLKKPRVYSGFSLTSAFFSSRRSGAAVTLVSRDDWKMAPELICILERAGQ
DVPEELVKMAARYEKHK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atagactgggacaccatccgcaggcagaaggacaagtttgcggagctcaagtgggccggc
ctcccgcctctggagaagcacttttacgtcgaggctgagagcgtgtccctgctgacgccg
gaggacgtcagcgaatggaggcgagtgcaacatccaaagaagaataacaatatctttgtg
gatgacctgaaggaggaaggcgagaagcggcccatccccaaaccttgccgcacgtttctg
gaggcctttgagcgttatccagagatcatggacaatatcaggcgcgttggttttgacaaa
cccacccccatccagtcccaggcttggcccgtgctgatgagcggcgaggacctgatagcc
atcgcccagacggggacggggaaaacgctggcctacctgctgccgggattcatccacatg
gacggccaacctgtacccagatctaagcggaacgggccggccatgttggtgctgacgcct
accagagagctggcgctgcagatcgaagccgagagcaagaaataccgcttcctggactac
acaagcgtctgcatctacggcgggggggaccggaacggccagatcgccaaggttcagagc
ggcgtggacattgtgatcgcgaccccgggccggctcaacgacctgcagatgaacgagctg
atccacctccgctccgtcacctacctggtccgtgtcagcatcgggtttcctgaggtcctg
gacgaggccgaccggatgctcgacatgggcttcgagcctcagatcatgaagatcctgctg
gacgtccgccccgaccgtcagaccgtcatgaccagtgccacctggccgactgctgtgaga
cgactggctaaatcctacctcagggaccccatgatcgtctatgtcgggactctggatttg
gctgccgttaacacggtggagcagaagatcctgatcgttaacgaagaggagaaaaagttc
tacatgtttgacttcatcagggacatggagcctctggacaaagttctcatctttgtcgga
aggaagatcttagtggacgacctgtccagcgacatgtgtctccagggaatatcagtgcag
agtctccacggcgaccgcgaacagtgcgaccgagaggaggctcttcgagagtttagggag
ggaaaagttcggatcctcgtggccacagatctggcatctcgagggctggacgtcctggac
ataacgcacgtcttcaactacgatttccctcgcaacatcgaggagtacgtccatcgcgtg
gggcgcaccggccgagcagggtgggtattttttttaaaaaagccgcgcgtttattccggg
ttttctttgacatctgcttttttttcctccaggcgctccggtgctgccgttaccctggtg
tcgagggacgactggaagatggctcccgagctgatctgcatcctggagcgggcgggacag
gacgtccccgaggagctggtgaagatggcagcgcgatacgagaagcacaag
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