Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018811G001
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Entry
GSTEN00018811G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K13129
survival motor neuron protein
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tng03041
]
GSTEN00018811G001
Spliceosome [BR:
tng03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
GSTEN00018811G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
BAHCC1-like_Tudor
Tudor_3
Tudor_2
LBR_tudor
Motif
Other DBs
NCBI-ProteinID:
CAG00384
UniProt:
Q4SG48
LinkDB
All DBs
Position
12
AA seq
308 aa
AA seq
DB search
MSNGCEEVLFTRGTGQSDDSDVWDDTALIKAYDKAVASFKNALKGEEMPQASKKTEPAKK
RKNSKKNQIRKRTNAQPENGWQVGDSCCAYWSEDGLIYPATIASIDEKTSTCVVVFKDYG
NEEQQNLDDLLSEFSEFDGETSTKVKETESSAEESDRSNTPSLHQHLPYTKPQXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXSQRAPPVWGSGFPGFIPGPPPHAFQKKGSRQSGSPGP
VPPSWPPMMPFGPPMIPPPPLMSADVVDDEALGSMLISWYMSGYHTGFYLGLKEGRKKAS
NWTKPHQK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgggtgtgaagaagtcctctttacacgaggaacaggacagagcgatgattcg
gacgtatgggatgacactgcgctgatcaaggcttatgacaaggcagttgcatcctttaag
aatgctttgaaaggggaggaaatgccacaagcctctaagaaaaccgagccagctaaaaaa
cgcaagaacagcaagaagaaccagatccggaagagaaccaacgcacaaccagaaaatggg
tggcaagtcggggactcttgttgtgcgtattggtcagaagatggcctgatctacccagct
accatcgcctccatagatgaaaagacgagcacctgtgtagtggtgttcaaggattacggc
aacgaggagcagcagaaccttgatgacttgctttctgaattttctgaatttgatggggaa
acatctaccaaggtaaaagagaccgagtcctcggcagaggagagtgacaggtcaaacacg
cccagcctgcaccagcatctgccctacacgaaacctcagnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnctcgcagcgagctcctcctgtgtggggctctggtttcccaggatttattcca
ggcccacctccgcatgccttccaaaagaaagggagcaggcagtctggcagtcctggacct
gtgcccccttcctggcctcccatgatgccttttggcccgcccatgatccctccacctcca
ctaatgagcgctgatgtggtagacgatgaagccctgggcagtatgcttatttcctggtac
atgagtggatatcacacagggttctacttgggtttgaaagaaggccgcaagaaagcttcc
aactggacaaaaccgcaccaaaaatga
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