Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018952G001
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Entry
GSTEN00018952G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14855
ribosome assembly protein 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00018952G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
GSTEN00018952G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
DSE1_N
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
ASA1
Beta-prop_WDR36-Utp21_1st
NLE
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR41
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_DCAF12
CFAP251_N
PAC11
Beta-prop_HPS5
Beta-prop_NOL10_N
TRM82_WD
Beta-prop_DCAF4
eIF2A
Beta-prop_Nup120_160
WD40_RFWD3
Tricorn_2nd
Ge1_WD40
RMC1_N
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
PD40
Cytochrom_D1
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-ProteinID:
CAG00490
UniProt:
Q4SFU2
LinkDB
All DBs
Position
7
AA seq
545 aa
AA seq
DB search
MNEDVERLLIQFQDENGETLGSPFDVPLDITTDKLQLVCNALLQNEEAVPLAFFVHGEAE
VVTSLASCVKDLQIETEQILPVMYQPLAVFRVRAVARCTSSLQGHTEAVISTAFSPTGKY
LASGSGDTTVRFWDLTTETPLYTARGHTHWVLSIAWSPDGKKLASGCKNSQICLWDPATG
TQLGRTLTGHTKWITWICWEPLHLNPECRYLASSSKDGSVRIWDTVLCRCEKILTGHTQS
VTCVKWGGDGLLYTSSQDRTVKVWRAKDASTRCGAQCRTLQGHAHWVNTLALSTDYVLRT
GAFEPATATVNPQDITGSLEEVKEKALQRYNKVRGSAPERLVSGSDDFTMFLWNPAEDKK
PLARMTGHSALVNEVLFSPDTRLIASASFDKSIKIWDGRTGKYLTSLRGHVASVYQVAWS
ADSRLLVSGSSDSTLKVWDVKTGKLNIDLPGHADEVRVARAPLPEGPHGPGRWRFSNLPV
ARAGVRSGLESRRTESGEWRERQMSPNVSKTQGRAAVSCACLVALTPCGLRADGEDNRAV
SQQQP
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggacgtggagcggctgttgatccagtttcaggatgaaaacggcgagactctg
ggctcaccgttcgacgttcctctggacatcaccacggataaactgcagcttgtctgcaat
gcactgctgcaaaatgaggaggccgtgcctctggcgtttttcgtgcacggagaggctgag
gtggtgaccagcctggcatcatgtgtgaaggatcttcagatagagacggagcaaattctt
ccggtgatgtaccagcctctggctgtgttcagggttcgagcggtggcccgctgcaccagc
agcctgcagggacacacagaggctgttatttcaactgctttcagccccactggcaagtat
ctggccagtggttcaggtgatactacggtgcgcttttgggacttgacaaccgaaacgcct
ctctacacagccagaggacacacacattgggtcctcagcatcgcttggtcaccagacggc
aaaaaactagcatcaggatgtaagaacagtcagatctgtctgtgggatccagcaacggga
acacagttgggcaggactttaacgggccacaccaaatggatcacttggatctgctgggaa
cctctccatctcaatccggagtgtcgatatttggccagcagctcaaaagacggctcggta
cgtatttgggacaccgtcttgtgccgctgcgagaagatcctgactggtcacacccagtcg
gtcacttgtgtgaagtggggaggagacgggctgctctacacgtcgtcccaggacaggacg
gtcaaagtctggagagccaaagatgcgagtacccgatgtggggcccagtgcaggaccctg
cagggccacgcccactgggtcaacactctggccctcagcactgactacgtccttcggacc
ggagcttttgagccagcaacagccaccgtcaacccccaggacatcaccggctccttggaa
gaagtgaaggagaaagctttgcaaagatataataaagtcaggggttcagcccccgagcgg
ttggtctctggctctgacgatttcaccatgttcctgtggaaccctgcagaagacaagaag
cccctggccaggatgactggccacagcgcgctggtcaacgaagtcctcttctcgccagac
accaggctcatcgcctcggcttcattcgacaagtctatcaaaatctgggacggacgcact
gggaagtacctgacgtccctgcggggccacgtggcgtctgtgtatcaggtggcgtggtca
gccgacagcaggctgctggtcagcggcagcagcgacagcactctgaaggtttgggacgtc
aagaccggcaagctgaacatcgacctcccgggtcacgctgacgaggtcagggtcgcacga
gcgccgcttcctgaaggtccccacggcccaggaaggtggcgcttctctaacttgcctgtt
gcgcgtgcaggtgtacgcagtggactggagtcccgacggacagagagtggcgagtggcgg
gaaagacaaatgtctccgaatgtgagtaagacgcagggacgtgcagcggtgtcctgtgcg
tgtcttgtggctctgacgccttgtggtttgcgtgcagatggagaagataaccgagcagta
tcgcagcagcagccgtga
DBGET
integrated database retrieval system
