Tetraodon nigroviridis (spotted green pufferfish): GSTEN00018980G001
Help
Entry
GSTEN00018980G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00018980G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTEN00018980G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
90S particles
Helicases
GSTEN00018980G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CAG00514
UniProt:
Q4SFR8
LinkDB
All DBs
Position
7
AA seq
649 aa
AA seq
DB search
MDSFELFRKLGAGAKFDFKRFAQDAARFKVRSHGVNPSTDHLSAIDYFSSGPTNGAQISS
NAENDRLEECEMESADSGVKGKRKLKHVKRDGKINKKKSKRDQMDVDGDCNSKDSNADIT
WTSLLDRKVHSLAADEKETLSLKRLKHLHQEKVNRIRSQHRINVHGSDIPDPVCTFDELQ
SEYHLNARILQNLKDAGLSSPTPIQMQAMPLMMHGRELLACAPTGSGKTLAFCIPLLAHL
QQPANLGFRAVIISPTRELASQTYRELLRLTDGAGFRVHIIDKASLAAKKYGPHSNKKYD
ILISTPNRLIFLLKQDPPALDLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSGSKV
RRAFFSATCTSDVEQWCRLNLDNLVSVNIGPRNTAVETVEQELLFVGTENGKLLAVREII
KKGFLPPMLVFVQSKERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLI
CTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGESLLSWGFSESISVPKKSTKRKEQEN
DFLKVFSNKVDFAHICLSSSDFLLFYLCSKGRTGRAGHRGKAITFFTENDKPLLRSIANV
IKQAGCPVPDYITGFKKIHSKVKRRLEKKPPKRSTICTTPRFLMKKKGK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggactcctttgaattgtttcgaaagctcggagctggggctaaatttgactttaaaagg
tttgctcaagatgcagcccggtttaaggtaagatctcatggcgtaaacccgtccacagat
catctctctgccatcgattactttagttcaggaccaactaatggagctcagatcagctct
aacgctgaaaatgaccgtctggaggagtgtgaaatggaaagtgcggattctggggtaaag
ggaaaaaggaagctaaaacatgtgaagagagacgggaagataaataagaaaaaatccaaa
agagaccagatggacgtggacggtgattgcaattcaaaagacagtaatgcagacatcaca
tggacatccttgttggacaggaaggtccacagcctggcagctgacgaaaaagagactctt
tcgctgaagagactgaagcatcttcatcaggaaaaggttaatcggattcgatctcaacac
cgtataaatgtgcacggctccgacattccagaccctgtgtgtacatttgacgagctgcaa
tctgaatatcatctcaatgcccgtatcctccaaaacctcaaagatgctgggctgagctcc
ccaacaccaattcagatgcaggcaatgccactaatgatgcatggtcgggagctactggcg
tgtgctcccacgggatcaggaaagacgttggctttctgcattccgctgctcgcccatctg
cagcagcctgctaaccttggcttcagagctgtgatcatttctccaaccagagagctagcc
agccagacctacagagagctgctgcgcctgacagacggagccggatttagagttcatatc
atagacaaagcttctctagcggcaaagaaatatggaccacactcaaacaaaaaatatgat
atactcatcagtaccccaaacagactcatctttctcctcaagcaagatcctccagctctt
gacctcagcagtgtggagtggctggtcgttgatgagtctgataagctttttgaagatggt
aagacgggcttcagggagcagctcgccaccatttttctggcctgttctggctcaaaggtg
cgccgggctttcttcagcgccacctgcacatccgacgtggagcagtggtgtcgattaaac
cttgacaaccttgtgtccgttaacattggtcccagaaacacagcagtcgagacggtggaa
caggagctgctgtttgttgggacggaaaatggcaaactgttagccgttagggagatcatc
aaaaaagggtttttgccacccatgctggtatttgtacagtccaaagaacgagctcgagag
cttttccatgagctggtttacgaaggcatcaatgtggatgtgatccatgctgaacgcacg
cagcagcagagagacaacgtcgtgaacagttttcgttcaggaaagatttgggttttgatc
tgcacagctctgcttgccagaggaattgacttcaagggggttaatcttgttctcaactat
gactttcccaccagtgctgtcgagtacatccaccgaattggtgagtctttactcagctgg
ggttttagtgagagcatttctgttcctaaaaaaagtaccaagagaaaggagcaggaaaac
gactttttgaaggttttcagcaacaaagttgattttgcacacatttgtctttcttcatct
gattttctgttattttacctttgttccaaaggtcgaaccggtagagctggacatagagga
aaggccatcaccttcttcacagaaaatgacaaaccgttgctgcgcagcatcgctaatgtc
atcaagcaagctggttgtcctgtgcctgactacataacaggcttcaagaagatacacagc
aaagtgaagcggagacttgagaaaaaacctcccaagcgcagcaccatttgcaccactcct
cgtttcttgatgaagaagaaaggaaaa
DBGET
integrated database retrieval system
