Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019293G001
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Entry
GSTEN00019293G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00019293G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
USH complex and associated proteins
GSTEN00019293G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-ProteinID:
CAG00762
UniProt:
Q4SF20
LinkDB
All DBs
Position
1
AA seq
593 aa
AA seq
DB search
MTFDSEGPDPTGNLSPSTAELAQCEAEMGTLLRIIAELNKKMGSLKPPRLNQRGGVVWAK
LQEVLASVEDSISSKRSWAAPITASDRAKQQQHLKAAEESWVKAAQVLKLSPSKENILDL
ETCDSQEELERLQSISQKEEEKLQVWRTLYDINAFLEDRIHHVCLSGWWFPQSLEVRLSI
PVLPAWSSQPRLGLSSFPWFPSPPPENIQVGGTSVSRYIERLKSKNERLNTALERTRVES
EQNSVRMRRLEADCSALQKALRYCLECEETYGDLLSLCDARKQRRYPPHTHSPVADGETP
QPDRSSPSLGRRDTEELSTSFSTAGVTEETEIRSRMGHSTPELMEREAALRQKIELLKRD
REAVSLPKASPGTEAETGLRACQQAGARAKMADPKKEKASLFHEFLSVREEMSDLRALVR
IKEKELRRLEWTLMAHKAQEATGAVVPENLREELQDCRSEQQRTSLEEEAGFGPGFSGQL
PRQEGQRRADRSTHTGSQVNSPSPARCHISTCLSETCCWCVRWIHPAGFSLSLSLSLSLS
KALSSYRQIRRKYREQVWRLEQKVAAMAEGQQQPGSPKPAEEFSEWRREETVL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgactccgagggacctgaccccacaggaaacctcagcccctcaacggcagag
ctggcccaatgtgaggctgaaatgggcacgctgctcagaatcatcgctgagctcaacaag
aagatgggttcactgaagccaccaaggttgaaccaaaggggcggtgtggtgtgggccaaa
ctgcaggaggttctggcctcagtggaggactccatcagctccaagagatcctgggctgcc
cccatcacagcttctgacagggccaagcagcaacagcacctgaaggcagctgaggagagc
tgggtcaaggccgcgcaggtgctaaaactgagcccatcaaaggagaacattttggatctg
gagacatgtgattctcaggaggagctggagagattgcagagcatcagtcagaaggaggag
gagaaactccaggtgtggagaacactgtatgacatcaacgcatttttagaggacagaatt
catcacgtctgcctttcaggttggtggtttccacaaagcctggaggtcaggctgtcgatc
cccgtcctaccggcctggagctctcagcccaggctgggcctctcctcctttccctggttc
ccctctcctccaccggagaacatccaggtcggaggcacctccgtctccaggtacattgaa
aggctgaagtccaaaaacgaacggctgaatacagctctggagcgaaccagggtggagtcg
gaacagaacagcgtcagaatgagaagactggaagctgactgctccgccctgcagaaggct
ctccgctactgtctggagtgtgaggagacctacggcgatctgctgtcactgtgtgatgct
cggaaacagcgaagatacccaccacacacacactcgccagtggcagacggtgagacgcca
cagcccgacaggtcatcaccttccctggggaggagggataccgaggagctgtccacctcc
ttttccacagcaggagtcacagaggagacagaaataaggagccgcatgggacacagcaca
cctgagctgatggagcgagaggccgcgctccgtcagaaaatagagctcctgaagagggac
cgggaagccgtcagcctgcctaaagcaagcccgggaacggaggcagaaaccgggctgaga
gcgtgtcagcaggccggtgccagagccaagatggccgatcccaagaaagagaaggcctcg
ctcttccacgagttcctctctgtcagggaggagatgtctgacctgagagctttggttcgc
atcaaagagaaggagctgaggcgcctggagtggactttaatggcccacaaggcccaggag
gcgacaggcgccgtcgtcccggaaaacctcagagaggagctgcaggactgtaggagcgaa
caacagagaacaagccttgaagaagaggctggttttggtccaggattctctggacagtta
ccccgccaggagggacaacgccgagcagatcgctccactcacacaggctcacaggtcaac
agcccttctcctgcccgctgtcatatttccacatgtttgtcagagacctgctgctggtgt
gtgaggtggattcatcctgctggcttctctctctctctctctctctctctctctctcagt
aaggccctgagttcgtaccggcagattcggcggaagtaccgggagcaggtgtggaggctg
gagcagaaggtggcggccatggcggagggtcagcaacaacctgggtcacccaaacctgca
gaggagttctcggaatggaggagggaggaaaccgttctatga
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