KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019300G001
Entry
GSTEN00019300G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03010  Ribosome
tng04120  Ubiquitin mediated proteolysis
tng04137  Mitophagy - animal
tng04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    GSTEN00019300G001
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GSTEN00019300G001
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    GSTEN00019300G001
   04137 Mitophagy - animal
    GSTEN00019300G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tng03011]
    GSTEN00019300G001
   04121 Ubiquitin system [BR:tng04121]
    GSTEN00019300G001
Ribosome [BR:tng03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    GSTEN00019300G001
  Archaea
    GSTEN00019300G001
Ubiquitin system [BR:tng04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   GSTEN00019300G001
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-ProteinID: CAG00768
UniProt: Q4SF14
LinkDB
Position
1
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRMLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgttgacggggaagaccatcacccttgaggtcgagcccagc
gacacgatcgaaaatgtcaaggcaaagatccaggataaggaaggtatcccccctgatcag
cagcgtctgatctttgctggaaagcagctggaggatggacgcacgctgtcggactacaac
atccagaaagagtccactctgcatctggtcctgcgcctgcgcggtggcatcatcgagccg
tcgctcagaatgctggcccagaagtacaactgcgacaagatgatctgccgcaagtgttac
gcccgcttgcaccctcgtgctgttaactgtcgcaagaagaaatgtggacacaccaacaac
cttcgccccaagaagaagctgaagtag

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