KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019457G001
Entry
GSTEN00019457G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GSTEN00019457G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tng03400]
    GSTEN00019457G001
Enzymes [BR:tng01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GSTEN00019457G001
DNA repair and recombination proteins [BR:tng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     GSTEN00019457G001
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C F22D3_4_N
Other DBs
NCBI-ProteinID: CAG00890
LinkDB
Position
undetermined
AA seq 873 aa
MAEQRFLVEYAKRGTAGCKKCKDKIVKGIVRIGKIVPNPFSESAGEMKEWYHVKCIFEKL
ERARATTKKIEDLTELEGWEELQDEDKNLIKEHISELMAKVNASPKKKVQAKLNTSGHLM
APPADPSVNAPRKFSGFTGKQQHLHPPMSSSTPGSSLSSQLCNPQHKDCLFREFRKLCAT
VAENNSYNAKTQIIEQFLRKGSGGDKFHGDLYLTIKLLLPGVIKSVYNLNDKQIVKLFSR
IFRCNQEEMVRDLEQVRKPSLPEILGSRASLFGSRMKLLWFLQGDVSETVRVFFDNSKSF
PPASKSLLTIQEVDASLTRLAQLTKEDEQQSELESIAKKCTSNDLKCIVRLVKHDLKMNA
GAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQQEASNGSGPRKLLTVEATLMTPVQPM
LAEACKSVEYAMKKCPNGMYSEIKYDGERVQVHKNGDSFSYFSRSLKPVLPHKVAHFKDY
IPQAFPGGHSMILDAEVLLIDTQTSKPLPFGTLGIHKVSSCSLLPEPSPSFSAPSSLTAL
TFRPSRKRPFRTLTCAFLFSTASTSTARASWRGKHAQRTSSASDPPVHPRRRAQRLLVVC
FLRPLCERRKFLHDNMVEVPNRILFSEMKHVTVGPGSAAVLTQLWEQHALTWFVLQRAAD
LADMITRVIREGLEGLVLKDVKGMYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGK
GSNGGIMSSFLMGCFDPDSKKWCTVTKCSGGYDDAMLARLQKELDVVKISKVREESATDT
HTHTHSHSNKILNFFSCVQDPSKIPQWLKIVKNYYPDFIIRNPEEAPVWEITGAEFSKSE
MHTADGISIRFPRMTRIRDDKDWKSATNLHQLK
NT seq 2619 nt   +upstreamnt  +downstreamnt
atggcagagcagaggttccttgtggaatacgccaagcgcggcactgcaggatgcaaaaag
tgcaaggataaaatcgtgaagggcatagtgcgcattggaaagatcgtgccgaaccctttc
agcgagtctgcaggcgagatgaaggagtggtaccacgtcaaatgtatttttgagaagcta
gagagagccagggccaccacaaagaagattgaagacctgactgagctggagggctgggag
gagctccaggatgaggataaaaacctcattaaagagcatatctcagagctgatggccaaa
gtaaacgccagtcctaagaagaaagtccaggccaagctgaacaccagcggccatctgatg
gcccctcctgctgacccttctgttaacgccccacgcaagttctcaggcttcaccggtaaa
cagcaacaccttcatccccccatgtcctcgtctactcctggcagcagcctgtccagccag
ttgtgtaacccccagcacaaagactgcctcttcagggagttccgcaaactctgcgccacg
gtggctgagaacaacagctacaacgccaaaacgcagattattgagcagttcctgcggaag
ggcagtggcggagataagttccacggagatctttacctgaccataaagctgctcctgccc
ggggtcatcaaaagcgtctacaacctgaatgacaagcagatcgtgaagctcttcagccgc
attttcaggtgtaaccaggaagagatggtgcgcgacctcgagcaggtcagaaaaccttca
ttgcctgaaattttaggatccagagcgtccttgtttgggagcaggatgaaacttctctgg
tttcttcagggcgacgtgtcagagaccgtccgggtgttctttgacaacagcaagtccttc
cccccggcctccaaaagtcttctgaccatccaggaggtggacgcctccctgacccgtctg
gctcagctgaccaaggaagatgagcagcagtccgagctggagtccatcgccaagaaatgc
acctccaacgacctcaaatgcatagttcgactggtcaagcatgacctgaagatgaacgct
ggagcgaaacatgtgttggatgctgtggatcccaacgcctatgatgccttcaaggcttca
cgaaatctgggcgatgtgatcgaccgggtgctgaggaaccagcaggaggcctcaaatgga
tcgggacccaggaaactcctcactgtggaggctacgctcatgacgcccgtccagccaatg
ctggctgaagcttgtaaatctgttgaatatgctatgaagaagtgccccaatgggatgtac
tcggagatcaaatacgacggggaacgagtgcaggtccacaagaacggagacagcttcagt
tacttcagccgcagcctgaagccagtgctgccacacaaagtggcgcactttaaggactac
atccctcaggcgttccctggaggtcacagtatgatcctggatgccgaagtcctgctgatc
gacacacagaccagtaaacctctgcccttcggaactctgggcatacataaggtttccagc
tgctcgttgcttccagagccttcccccagtttttctgctccttcttctctgacagctctc
actttccgtccctccagaaagcggcctttcaggacgctaacgtgtgcctttttgttttcg
actgcatctacttcaacggcacgagcctcatggagaggtaaacatgctcagagaaccagc
tctgccagtgacccacccgtccatccacgccgccgagctcagaggctgcttgttgtctgt
ttcctcaggcctctgtgtgaacgcagaaagttcctgcacgacaacatggttgaagttccc
aacaggatcctgttctcagagatgaagcacgtgacggtaggtcctggcagcgcggcggtt
ctcactcagctgtgggagcagcacgcgctcacgtggtttgtgctgcagagggcggctgac
ctggctgacatgatcactcgggtcatcagggaagggctggaaggtctggtgctgaaggat
gtcaagggcatgtatgaaccaggaaaacgacactggctgaaggtcaagaaggactactta
aacgagggcgcaatggccgacacggcagacctggtggtgctcggcgccttttatggaaaa
ggctccaacgggggcatcatgtccagttttctgatgggttgttttgaccccgactccaag
aaatggtgcacggtcaccaagtgttcgggaggctacgacgacgccatgttggctcgactt
cagaaggagctggacgtggtcaagatcagtaaggtcagggaagaatcagctacagataca
cacactcacacacactcacactctaataaaatcctcaatttcttttcctgtgtgcaggac
cccagcaaaatcccacagtggctgaaaattgtcaagaattattacccagatttcattatc
cgtaatcctgaggaggcgccagtctgggagatcacgggagcagaattctccaaatcagag
atgcacacggctgatggaatatccatccggttcccccgcatgacccgtatccgtgacgac
aaggactggaagagcgccaccaacctgcaccagctgaag

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