Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019572G001
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Entry
GSTEN00019572G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
tng04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00019572G001
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
GSTEN00019572G001
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tng01002
]
GSTEN00019572G001
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00019572G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00019572G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00019572G001
Peptidases and inhibitors [BR:
tng01002
]
Metallo peptidases
Family M67
GSTEN00019572G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
GSTEN00019572G001
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
GSTEN00019572G001
BRISC complex
GSTEN00019572G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
GSTEN00019572G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
GSTEN00019572G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF2927
Motif
Other DBs
NCBI-ProteinID:
CAG00968
UniProt:
Q4SEG4
LinkDB
All DBs
Position
undetermined
AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVEITRIVHVQSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMLDQCFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERVEIPIHVVPRDAIGKACLESAVEL
PRILCQEEQDTYRKIHSLAHLDPVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNK
QSLMQLQREKERLQQELAAL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgagcgcggttcacctggagtcagacgcctttctggtgtgtatgaaccatgct
ttgagcacagaaaaagaagaggtgatgggtttgtgcatcggggaggtggagattactcgc
attgttcacgtccaatcggtcatcatcctccgccgctccgacaagagaaaggaccgggtg
gagatctccccggagcagctgtcagcagcctccaccgaggcggagaggctggcagagatc
acaggccggccgatgcgggtggtgggctggtaccactcccaccctcacatcaccgtgtgg
ccctcccacgtcgacgtgagaacccaggccatgtatcaaatgctggaccagtgtttcgtg
ggccttattttctcctgcttcattgaggacaagaacacaaagaccggacgggtactgtac
acctgcttccagtccgtgcaggcgcagaaaggctccgagtacgagcgggtggagatcccc
atccacgtcgtgccccgggacgccattggtaaggcttgtttggagtcggccgtggagctg
ccccggatcctgtgtcaggaggagcaggacacctatcgcaagatccacagcctggcgcac
ctggacccggttaccaagatccacaacggctcggtgttcaccaagaacctgtgcagccag
atgtcggcggtgagcgggccgctgctgcagtggctggaggaccggctggagcagaacaag
cagagcctgatgcagctgcagcgggagaaggagcggctccagcaggagctggcagctctg
DBGET
integrated database retrieval system
