Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019715G001
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Entry
GSTEN00019715G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00019715G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00019715G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00019715G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
zf-C3HC4
WDR55
zf-ANAPC11
zf-rbx1
zf-C3HC4_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
zf-C3HC4_4
zf-RING_11
Beta-prop_RIG_2nd
WD40_2
CFAP43_N
WD40_Prp19
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
Beta-prop_SPT8
zf-RING_16
Motif
Other DBs
NCBI-ProteinID:
CAG01084
UniProt:
Q4SE48
LinkDB
All DBs
Position
undetermined
AA seq
733 aa
AA seq
DB search
MEVDSPPGLGAPPGDAPSVISDSGSSTEVEEDEDDGGQTAGAAPRLPSTWAFSQRAASSA
AAAPATQGPPLRRRVRQGLRVHYPSQTAAPSTGFPDFLLRAPAAGAGRPESGSTTEVSDS
EEEDAGGAEGPADREVEEPPQEAPPSDSRSADGTPAPDPLPQPLPTACAPAPPPCGEEGE
GDSCTICFEAWTAAGEHRLSALRCGHLFGFTCIQRWLKAQGAAGKCPQVSRSHSPGLALE
TPQDDRSVPVPAPVPVSVVQQESQAFGHRPAVRAQAKGPGQHRAGEPEEVSEEQTPWFLV
PGSWFLVPNPGLLRSLEQEQSLRRKAELESAQYKLKLQVVANKYGRAQEELQELKALIAG
RGSLPSSSPASSFSSPSSLVLGVSQRLDGSRTAQYSFSKAVLVSQGGGCRVLAYCEPLSC
LLASQPSPHSTLLPGFGIKKVSVVSMKASQYVPVHSKQIRGLSFNGQQDSLLLSAALDNT
VKLTSLLTNTVVQTYNAGRPVWSCCWSLDNSNYVYAGLNNGSVLVYDTRDTSTHVHELQP
LRSRCPVASLCYVPRAASSAFPCGGLIAGSLEGACFWEQVSDTYRPHVLPLEAGGCIDIQ
VEAESRHCLVTYRPGRANPALRCVLMALTRTPLQDSAQPPSCSCSPVQTFAAGSSCKLLT
KNAVFRSPAGSGTLVCAGDEASSSTMVWDAGSGSLLQKLPADLPVLDVGPFAVNGEHFLA
SLTEKMLKLYRWE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggactccccgccaggcctgggggccccacctggagatgccccctccgtcatc
tcagactcgggcagcagcacagaggtggaggaggacgaggacgacggaggacagactgct
ggagctgctcccagacttcccagcacctgggccttcagccagcgagccgccagcagcgcc
gccgccgctccggccacgcaggggcctcccctccggaggagagtcagacagggcctaagg
gtgcactaccccagccagacggcagcgccctctacaggcttcccagacttcctgctccgc
gccccggctgccggggcgggccggcccgagtctggcagcaccacggaggtcagtgattcc
gaggaagaggacgccggcggtgccgaaggccccgcagaccgagaggtggaggagccgccg
caggaggctccgcccagcgactcccgatcagctgacgggaccccggcgccggatccgctt
cctcagccccttcctaccgcctgtgctccggccccgcccccctgcggcgaggagggcgag
ggcgactcctgcaccatttgctttgaagcctggacggcggcgggcgagcaccgcctgtct
gcgctccgctgcggacacctgttcggcttcacctgcatccagcgttggctgaaggcccag
ggcgccgccggcaagtgtccacaggtcagcaggtcacacagccccggcctggccctggag
actccccaggatgaccgctctgtccccgtccccgcccccgtccccgtctccgtagtgcaa
caagaaagccaagcgttcggacatcgtcctgctgtacgcgcccaagctaaaggccctgga
caacaccgagcaggagagcctgaagaagtgagtgaggagcagaccccctggttcctggtt
cctggttcctggttcctggttcctaaccctggtctcctcaggtccctggagcaggagcag
tccctgaggaggaaggctgagctggagtcagcccagtacaagctgaagctgcaggttgtc
gccaacaagtatggacgggctcaagaggagctgcaggagctgaaggctctgatagcaggc
agaggctctctcccctcctcttctccagcctcctccttttcctcgccgtcgtccctcgtc
ctcggcgtgtctcagaggttggacgggtccaggacggcccagtacagcttctccaaggcg
gtgctggtgtcccagggcggagggtgtcgggtcctggcctactgcgagccgctcagctgc
ctgctggcctctcagccgtctcctcacagcacgctgctcccaggattcggcatcaagaag
gtgagcgtggtgagcatgaaggccagccagtacgtccccgtccacagcaagcagatccga
ggactgtccttcaacgggcagcaggacagcctgctgctgtctgctgccctggacaacacc
gtcaaactgaccagtctcctgaccaacacggtggtgcagacctacaacgctggccggccg
gtctggagctgctgctggtcgttggacaacagcaactacgtctacgctgggctcaacaac
ggctccgtgctcgtctacgacaccagggacaccagcacgcacgtgcacgagctgcagccg
ctgcgctccaggtgtcccgtagcgtccctgtgttatgtcccgcgcgcggcgtccagcgcc
ttcccctgcggcggcctgatcgccggctccctggagggggcgtgtttctgggagcaggtg
agcgacacctacagaccccacgtgctgcccctggaggccggcggctgcatcgacatccag
gtggaggcggagagccgccactgcctggtcacctacaggccagggcgcgcgaacccggcg
ctgcgctgcgtcctgatggccctgacgcggacgcccctgcaggactcggcccagccgccc
agctgctcctgctcgcccgtgcagacctttgctgccggctcgtcctgcaagctgctcacc
aagaacgccgtcttcaggagccccgccggcagcgggacgctggtgtgcgctggcgacgag
gcctccagctccaccatggtgtgggacgcgggcagcggctctctgctccagaagcttccg
gctgacctccccgtgctggacgtcggtccttttgcagtcaacggcgagcacttcctggcc
tcgctcaccgagaagatgctgaagctgtaccggtgggagtga
DBGET
integrated database retrieval system
