Tetraodon nigroviridis (spotted green pufferfish): GSTEN00019916G001
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Entry
GSTEN00019916G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00019916G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00019916G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00019916G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00019916G001
Coactivators
SAGA/TFTC/STAGA complex
GSTEN00019916G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
GSTEN00019916G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-ProteinID:
CAG01222
UniProt:
Q4SDR0
LinkDB
All DBs
Position
undetermined
AA seq
1046 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLAGQSNPAGKTEENGGTGSVPPANHHLGK
TLPASVGTTTPEQQQQQQQQQQQGRRNKPEMRQDVNSKDVSPDRTSTSPSQGCSPPPAST
TSAAGVNATSSGSVSHRAPVTTLTESAVSTLATTQARISTTSERGSKVVPGTGEASTEAN
PPRKRITTPRRAASARIKSLNGAAVTTRRSSNTVMAENVNASPADTNTTTHNSTPAVRSP
INTSTFTLSHANLPVGQSAVALDRGTPTIALQRLPNHIVAIAQNGNGTSVSALVQQSPRT
APAASSASPVNQEKEVTDTAPCKKDDCQSKTVLSSQSSTVNSVINAVSTAPRVVTPPLTT
TAAATTTTTVTQPLSSAAAPACSTGAAATTSVCATSQISTVTTTLTMVRPAAPSPTATVA
TAAPAQPRPGLSAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGKVAGCCIYASFSIYVA
QCAVYSLMNVPSGPLGMVLVRTELGQLVMVPQQALAQVQAQAQAQAQNNISPRPATPTTG
ASYRVATPQKGPLAPAVAVMAPQQTPVVMAPQGLSQAPSQPVQPPQSGIATASGAPVVSQ
VCFCAHYTPCPLHSTLKGAGTVTSARRPAEMQENVKKCKNFLATLIKLASHNSPSPETSK
NVKALVQDLLDAKIEPEEFTSRLQAELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQP
PQQGVKTAPGGTPTAMVTGPAVRIHHPNSISTTGGANVLPTGTLAGHSGAVGIKTAGAVG
GHVRMPVVITQSVRAQGMKKKKIKYATFRESTVGKGTIIQTGKSPLGMAVQISGNQKNKL
NDPGGGSFRYILPEELLPFLVYLTWGQHFSKMPLRTAGYSLSLGSKRFGVTEVPMEAVTF
ISHAAQSRLRTVIEKVSTVAQHRLDSCKDDEYYEQTADVRSQLRFFEQLERIEKQRKDEQ
EREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKQQSE
CDFSKGVTGCLEACGCYWTVACSQLH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctcagaccccctggaagatatgctcttttcagaggtggatgagaaagcc
gtgagcgacttggtaggctcgttagaatcccagcttgctggccaaagcaatccagcaggg
aaaacagaagaaaacggaggcactggctcagtgcctcccgctaaccatcacttaggaaaa
acgttaccagcttcagtgggcaccacaacacctgaacaacaacaacaacaacaacaacaa
caacaacaaggacggcgtaataaacccgagatgcgacaagacgttaactccaaagacgtc
agcccggatagaacttctacgtccccttcccagggctgctcccctcctccggcgtccacc
acttcggctgccggtgtgaacgcgacgagtagcggttcagtatcgcaccgagcacccgtc
acaacactgactgaatctgctgtgtcaactttggcaaccacgcaagccaggatcagcacc
acatcagaacgggggtctaaggttgtccctggaacaggtgaggcgtccacggaggcgaac
ccaccgaggaaacgtatcaccaccccgcggagagcagcttctgctcgtataaagagtttg
aacggcgcagctgtaacgacgagaaggagcagcaatacagtcatggcagaaaatgtcaac
gctagtcccgcggacacgaatacaactacacacaactctactccagcagtgagatccccg
atcaacacctcaacgttcactttatctcacgctaacctcccagttggtcagtcggctgtt
gctcttgatcgggggactccaaccatcgctctgcagagactcccgaaccacatcgtagcg
attgcacagaacggaaacgggaccagtgtttcggccttggtccagcagagtccgcggaca
gcacccgctgcgtcttcggcatcaccggtaaatcaagaaaaagaggtcactgacacggca
ccatgcaaaaaagacgattgtcagtccaaaacagtgttgtcaagccagtctagcactgtc
aactctgtcataaatgcagtttccacagcacccagggttgtcaccccaccactaacaacc
acagcagcagccacaaccaccacaacagtgacccaacctttgagctctgccgcagctcct
gcctgttccacaggggcagcagcaacaacttctgtgtgtgcaacttctcagatttcaaca
gtgaccaccactcttacaatggtcagacccgcagctccttctcccacagctactgtggcc
accgcagcaccagctcagccccgtccgggactttcagcacctcaaaggattgttgcccct
cagctgattgtcagaccacctcagcagcagacaacaattcagttgccccctggatttacc
atcccaccgggtaaggttgcagggtgttgcatttacgccagcttttcgatttatgtcgca
cagtgtgctgtgtattctttaatgaatgttccctctggtccgttagggatggtgttggta
cgcacagagttgggtcagctcgtgatggttccacagcaggctctggctcaagttcaggct
caagctcaggcccaggcccagaacaacatctccccacgacctgccacccccacaacgggt
gcatcttacagagtagcaactccacagaagggccccctggcaccagccgtggctgtgatg
gctccacagcagacccctgtagttatggccccgcagggcctcagccaggctccatctcag
cctgtgcagcctccgcagtcaggcatcgccacggcctccggtgctcctgtcgtgtcccag
gtttgtttctgtgcccactacaccccctgccccctgcactccaccctcaagggtgcaggc
actgtcacatctgccaggaggccggctgaaatgcaggagaatgtcaagaagtgtaaaaat
tttctagccacacttatcaagttggcatcccacaattctccatctcccgagacttctaaa
aacgtcaaggctctggtccaggatctgttggatgccaagattgaaccagaggaattcacg
agtcggctgcaggctgaactcaagtcttctccacagccttacctagtgccgtttctcaag
aagagcctcccggccctgcggctttctttactgaatagtcagcagtcgctgacacagccc
ccgcagcagggagtcaaaacagcacctggtggcactcctaccgcgatggtgactgggcca
gctgtccgaatacaccatcctaacagcatcagcaccactgggggagccaatgtgttgccc
actggtactcttgcagggcattcaggtgccgtgggcattaagacagcaggtgctgttggt
ggccatgtcaggatgcctgtggtcatcacccagtctgtcagagcacaaggtatgaaaaaa
aaaaaaattaaatatgctacatttagggaaagtacagtgggaaagggaactatcatccaa
acaggcaaaagtcctctgggtatggctgttcagatctctgggaatcagaaaaacaagctc
aatgaccctggaggaggctctttcaggtacattctgccagaagagttgctgcctttctta
gtatatctcacatgggggcagcatttctctaaaatgcccctcagaactgcaggctattct
ctcagcttaggctccaagaggtttggagtcacagaagtccctatggaggcggtgacattt
atctcacacgctgcacagtcgcgacttcgtaccgtcatagaaaaagtttccactgttgca
cagcatcgattggactcctgtaaggatgatgagtactatgagcaaacggcagacgttcgc
tctcagcttcgcttctttgagcagctggagagaatcgagaagcagaggaaggatgagcag
gagagagagatccttttaaaagctgctaaaagtcgctccaggcaagaggacccagaacag
gctcgactaaaacagaaagctaaggagatgcaacaacaggaactagctcagatgagacag
cgagatgctaacctgacagcgctagccgccattggaccacgcaaaaaacagcaaagtgaa
tgtgacttttctaaaggggtcacaggatgcctggaggcctgtgggtgttactggactgtt
gcctgctctcagcttcactga
DBGET
integrated database retrieval system
