Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020020G001
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Entry
GSTEN00020020G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04110
Cell cycle
tng04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
GSTEN00020020G001
04114 Oocyte meiosis
GSTEN00020020G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00020020G001
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tng00535
]
GSTEN00020020G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
GSTEN00020020G001
Meiosis-specific proteins
Cohesin complex and associated proteins
GSTEN00020020G001
Proteoglycans [BR:
tng00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
GSTEN00020020G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
SMC_hinge
AAA_23
AAA_29
CreS_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAG01298
UniProt:
Q4SDI4
LinkDB
All DBs
Position
18
AA seq
1156 aa
AA seq
DB search
QVIIQGFRSYRDQTVVDPFSPKPNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLAL
LHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNL
LESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEG
KREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELST
KRETCGDKSRQLRDAQQDARDKVEETERVVRELKSKISAMKEEKEQLSAERQEQIKQRTK
LELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFSMVKEKEERGISR
LAQATQERTDLYAKQGRGSQFTSKEDRDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTE
TNKEKNLEQYTKLDQDLNEVKNRVEELDKKYYEVKNRKDELQSERNYLWREENAEQQALA
AKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVISGYHGIVMNNFECDP
AFYTCVEVTAGTRLFYHIVDTDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAYPETN
IDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAM
ESTRESLKAELGTDLLSQLSLEDQRRVDDLNDEIRQLQQLPFVCSDGLTEDNRQLLNERI
KLEGIMTRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELDGINKRVKDTLAR
SDDLDTLIDKTEGEIKEHIRSMDRWKTIEKEQNDAINHDTKELEKMTNRQGMLLKKKEEC
MKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEK
LIKRQDELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKK
GDAEGSQSQDEGESGVDSERGSSSQSSVPSVDQFTGVGIRVRGSAARFRQAVSFTGKQGE
MREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIVELAGHA
QFITTTFRPELLESADKFYGVKFRNKVGSPAERPRNHVRGSSSLILFFCLGESHRRDHSG
AGQRLCGGRHHPRLRL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
caggtaatcatccaggggttccgaagctacagggaccaaacggtggtggacccttttagt
cccaaacccaacgtcatagttgggagaaatggttctggaaagagtaactttttctatgcc
attcagtttgtcctcagtgatgagttcagccacttgcgacccgaacagcggttggcccta
cttcatgagggaacggggccccgcgtcatttcagctttcgtggaaattatatttgacaac
tccgacaaccgtttaccgattgacaaagaagaagtctctcttcgccgtgtcatcggtgca
aaaaaggaccaatacttcttagacaaaaagatggtgactaaaaacgatgtcatgaatctt
ctggagagtgccggcttttcccgcagtaacccctactatattgtcaaacagggcaagatc
aaccaaatggcaacagcccctgactcccagcgtctgaagctgctgagagaggtggcgggg
acccgggtttatgatgagcggaaggaggagagtatttctctcatgaaagaaacagagggg
aaacgagagaagattaatgagctgctaaagtacattgaggagcgtttgcacactctggag
gatgagaaggaggagttggctcaatatcagaagtgggataagatgagaagagccctggag
tacaccatctacaaccaggagctgaatgaaacccgtgccaaactggatgagctgtccacc
aaaagagaaacctgtggagacaaatccagacagttgcgggacgctcagcaagatgccaga
gataaagtggaggaaacggagcgcgtcgtccgagaactgaagtctaagatctccgctatg
aaagaggagaaagagcagttatcggccgagcgccaggagcagatcaagcagaggaccaag
ctggagttgaaggccaaggacctgcaggatgagctggcaggcaacagtgaacagaggaaa
cgtttgctgaaagaacggcagaaacttcttgagaaaattgaagaaaagcaaaaagaactt
caggagactgaacccaaattcagcatggttaaagaaaaggaagaacgtggaatctcgaga
ctggcccaagctacacaggagaggaccgacctgtatgctaaacagggccgtggcagtcag
tttacctctaaggaagacagggacaagtggattaaaaaggagctgaagtccctggaccag
gccatcaatgataaaaagaggcagattgcagccatccacaaagacctggaggacacggag
acaaacaaggagaagaacctggagcagtacacgaaacttgatcaagacctaaacgaggtc
aagaatcgtgtggaagaattggacaaaaagtattacgaagtgaaaaacaggaaagatgag
ctgcagagtgaaagaaactacctgtggcgagaagagaacgcggagcagcaggccctggca
gctaagagagaggacctggagaagaaacagcagctccttcgcgctgcaaccggcaaggcg
attctgaatggcattgatagcatcaacaaagtccttgaacattttcgccggaagggcatc
aaccagcatgtcatcagcggttaccatggcattgtcatgaataattttgagtgcgatcct
gctttttacacttgtgtggaggtgacagctggtaccagactcttttaccacattgtggat
acagatgaagtcagtactaaaatactgatggagttcaacaaaatgaacctgcctggagaa
gttaccttcctgcctctgagcaagctggacgtcagagacaccgcctatccggagaccaac
atcgaccaactgatgaaccagatgcagcaaattgagacccaacagaggaagttcaaggcc
tcccgagacagtattctgtcagagatgaagatgctgaaagagaagaggcagcagtccgag
aagaccttcatgccaaaacaacgtagtctccagagtttggaggccagcctccacgccatg
gagtccaccagggagtcgctgaaggccgagctgggcacagatctgctctctcagctcagc
ctggaggaccagcggcgcgtggatgacctcaacgacgagatccgtcaactgcagcagctc
ccgttcgtatgttcagatgggctgactgaggacaaccggcagttgctgaacgaaaggatc
aagctggaggggataatgaccagggtggaaacctatcttaatgagaatttgcggaagcgt
ctagaccaagtggagcaggagctaaacgagttacgagagactgaggggggcacggttctc
acagccacaacgtccgagctggacggcatcaacaagcgcgtcaaagacaccctggctcga
tccgacgatctggatactctgattgacaagacggagggggagatcaaggagcacatcagg
agcatggaccggtggaagaccatcgaaaaggagcagaacgatgccatcaaccacgacacc
aaggaactggagaagatgaccaacaggcagggtatgctgctgaagaagaaagaggagtgc
atgaagaagatcagggagctgggctcgctcccccaggaggcctttgagaagtaccagacc
ctcacactcaaacagctgttcagaaagttggagcagtgcaacacggagctgaagaagtac
agtcatgtcaacaagaaagctctggaccagtttgtcaacttctctgagcagaaggaaaag
ctgatcaagcgccaggacgagttggaccgcggatacaagtccatcatggagctcatgaat
gtgctggagcttcgcaagtatgaggccatccagctcacctttaaacaggtgtcaaagaat
ttcagcgaggtcttccagaaactggtgcccggtggcaaagccaccctggtgatgaagaag
ggggatgcggaaggcagccagtctcaggacgaaggcgagagcggcgtggacagcgagagg
ggctccagctcgcagagcagcgttcccagcgtggaccagttcaccggcgtcgggatcagg
gtcagagggtcggccgccaggttccgccaggctgtgtccttcacagggaagcagggcgag
atgagggagatgcagcagctgtccggaggtcagaagtccctggtggcgctggcgctgatc
ttcgccatccagaagtgcgaccccgcccctttttacctgtttgatgaaatcgaccaggcc
ctggacgcccagcacaggaaggccgtgtcagacatgattgtggagctggcaggccacgcc
cagttcatcaccaccaccttcaggccggagctgctggagtcggctgacaagttctacggt
gtcaaattcagaaacaaggtgggttcccctgctgaacgaccgcgtaaccacgtgcgtgga
agcagcagcctgatcctgtttttctgcctaggtgagtcacatcgacgtgatcacagcgga
gcaggccaaagactttgtggaggacgacaccacccacggttaagactctga
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integrated database retrieval system
