Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020136G001
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Entry
GSTEN00020136G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00020136G001
04082 Neuroactive ligand signaling
GSTEN00020136G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00020136G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00020136G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
RDD
Motif
Other DBs
NCBI-ProteinID:
CAG01382
UniProt:
Q4SDA0
LinkDB
All DBs
Position
1
AA seq
472 aa
AA seq
DB search
MSTKLLAFIALLSAFYARSLSLEYEEDYEDVIVNQMLVPKSQDTDTTEILNSLLKEYDKK
LRPDIGVKPTVVDVDIFVNSIGPVSSINMEYQIDIIFAQTWIDSRLRYNSTMKLLTLNSN
MVGLIWLPDTIFRNSKTADSHWITMPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMD
EHSCPLVFSSYGYPRDEMIYKWRKNSVEAADQKSWRLYQFDFMGLRNTTDIIKTTSGDYV
VMTVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTALGITTVLTMTTLSS
VARTSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSHSARRPSCMQHKRLVNKKHI
TYSVLDVQPPPSVITLNNAMYWQDFEETCVYECLDGKDCQSFFCCFQECKGGAWRRGRVH
IDLLELDAYSRVFFPHLLPAVQHRLLGGLPLPLAPCWTTEEGWTSSRNQIKL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaaattattggcttttatcgcgctcctgtctgccttttacgcacgctcttta
tcactcgagtatgaagaggactacgaggacgtcattgtgaaccagatgctggttcccaaa
tcacaggacacagacaccaccgaaatcctcaacagtttactaaaagagtatgataagaaa
ctgcgaccggatatcggagttaaaccaactgttgtggatgtggacatatttgtaaacagc
atcgggccagtatcatcaataaatatggaatatcagattgacatcatctttgcccagacg
tggatagacagccgtctcagatacaacagcaccatgaaactgttgactctcaacagcaac
atggttgggcttatttggctgcctgacaccatcttcaggaactccaagactgcagattcc
cactggatcaccatgcccaaccagctgctcagaatatggaacgacggcaagattctttac
accttaaggctgaccataaatgctgagtgccagctgcagctacacaactttcccatggac
gagcactcgtgtcctctggtcttctccagctatggatacccacgagatgagatgatttac
aagtggaggaagaactctgtggaggcagctgaccagaagtcctggcgcctctaccagttt
gatttcatgggcctgagaaacactacagacataattaagacgacctcaggtgactacgtg
gtgatgacggtttactttgacctgagcaggaggatgggctacttcaccatccagacttac
atcccgtgcatccttaccgtggtcctctcctgggtgtctttctggatcaaaaaagacgcc
acgccagccaggacagctttaggtataaccaccgtgctgaccatgacaacgctcagtagc
gtggctaggacgtcgctacccagagtgtcttacgtcaccgccatggacctgtttgtgacc
gtctgcttcctctttgtgtttgccgctctgatggagtacgccacgttaaactactactcg
cacagcgcacgaagacccagctgcatgcaacataaacgtctggtgaataaaaaacacatc
acctactccgtcctggacgtgcagcctcctcccagcgtcatcacgttgaacaacgccatg
tactggcaggactttgaggaaacgtgtgtctacgagtgtctggatgggaaagactgtcag
agcttcttctgctgcttccaggagtgtaaaggaggcgcgtggaggagaggaagagtccac
atcgatttactggagctggacgcctactcacgcgtcttttttccccacctccttcctgct
gttcaacatcgtctactgggtgggctacctctacctttagcaccgtgctggaccacagag
gaaggatggaccagctccagaaaccagataaaactctga
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