Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020350G001
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Entry
GSTEN00020350G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00020350G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00020350G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
SRTM1
Motif
Other DBs
NCBI-ProteinID:
CAG01547
UniProt:
Q4SCT5
LinkDB
All DBs
Position
7
AA seq
1035 aa
AA seq
DB search
MTVVDIYATGFSHLCCFQTWVDFLRIVALDLTLNVEKITCWLTKAWMKPRGSASRLAWAG
MDTLGLKTGLCGKWQIMYCSVLCACLLDAVWGQIRYSIPEELEHGAFVGNIAEDLGLDAD
KLSARRFRIVSGGKRQYVEMNLENGVLFVNERIDREELCEQSLSCAFHLQVVIENPLELY
RVELEILDVNDNSPSFPWTEFNLDISESAAPGSRFPLESAQDSDVGSNSLRTYLLSVNEH
FLLDIQTRSDGSKFAELVLQTPLDREQQSAHQMVLTAVDGGAPERSGTAQIDITVLDAND
NAPVFDQSFYRVRLAENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPLKVRQLFSVDP
RTGEIKVKGVIDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNVLDKNDNIPDVILTSVST
PVQEDAPPGTVIAVISVTDKDSGENGNVDCEISHHVPFQLHSSFKNYYTLVTSDFLDRES
VAEYNITLTARDMGSPPLFTRKTILVQVADVNDNAPRFKQPSYTVYLTENNAPGASICAV
TALDPDSGQNAYISYSVHEGDIQGMPVSTYVSINSDNGNIYALRSFDHEQLKNFQITVQA
QDAGLPPLSNNVSIVIFVLDQNDNPPVIVSPVSRNGTAPDQAVPRSADAGHLVTKVRAVD
ADAGQNSRLLYQMIQATDPTLFSVALYTGEVRTIRQLVEKDPTRHRLVILVKDNGQPALS
ATVSISLSVVDSLPESKPDQSDLSQSSRHSSNLTLYLIVSLGAVSFTFLVAIIVLVVVQR
LKGRPSNKSSLPFIPSLCGCCRRTETRATTEVFRKSNLNVRMASGPEAAGSGPIPQVYCY
KMCLTPESKKHDFMFLKPCSPVLSAQQNNAKSTDYLTSGWSTLDRSELVKNRALTPNELK
YSNKDWTWTKNQCNSAYKRYSSGNMDADGLTCSVAPQYWTWGNQKKEHRAAFQEGAGPNS
SWAPKYTQPQCERPDYQHNVYIPGTTSNYSMLKMAPRGDLDVYNTFSTFGKKKKWSHYDQ
SFERQEDLIRDAIFK
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggtggacatctatgccacgggcttttcacacctctgctgctttcaaacgtgg
gtggactttctcagaattgttgcactggatttgacgttgaatgtggagaagatcacctgc
tggctgacgaaggcgtggatgaaaccccgtggctctgcttcccggctcgcctgggctgga
atggacacgctggggttgaagactggactctgtgggaaatggcagataatgtactgttct
gtgctgtgcgcctgccttttggacgcagtttggggacagatccgctactctatcccagag
gaactggaacacggggcttttgttggaaacatagcagaggacctgggtttggatgcggat
aagctctctgcgcgcagattccggatcgtctccggcggcaagaggcagtacgtggaaatg
aatttggaaaacggagttttgttcgtcaatgagagaatcgatcgcgaagagctgtgcgag
cagagtttgtcctgcgcttttcacctgcaagtggtgatcgaaaaccctctggagctgtac
agggtcgagctggagattctggacgtgaacgacaactctcccagttttccgtggaccgag
tttaatctggacatatcggagtcagccgcgccgggatcacgtttcccactcgagagcgcg
caggattcggacgtcggctccaactctttgcgcacgtatttgctgagcgtcaacgagcat
ttcctcctggacatccagacgcgcagcgacggcagtaaatttgcagagctcgtcctgcaa
accccgctggacagagagcagcaaagcgcgcatcaaatggtcctgaccgcggtggacgga
ggcgcgccggagagatccggcaccgcgcagatcgacatcacggtcttggacgcgaacgat
aacgcgcccgtgtttgaccagtccttttacagagtgagattggccgagaacgcaccaaaa
ggcacagttgtgatcaagttaaatgcgtcggatttagacgagggtcccaacgcggacatt
acttactccttcagtggccacgcgcccctcaaagtgcgccagctttttagtgtcgatccg
cgcacgggggaaatcaaagtgaaaggagtgatcgattatgaaaaagccaggatgcacgaa
atttacgtccaggccaaagacaaaggcccctccgctgtggcggtgcactgcaaagtgttg
gtgaacgtgttggataaaaatgacaacatcccggatgtgatcctcacgtcggtgtccaca
cctgtgcaggaggacgcgcccccggggacggttatagccgtcatcagcgtgacggacaaa
gactccggagagaacggcaacgtggactgtgaaatctcgcaccacgtcccctttcagctc
cactcatccttcaagaactactacacgctggtcacgtcggattttctggatagagagtcg
gtggcggagtacaacatcaccctgacggcccgggacatgggctccccgcctctgttcaca
aggaaaacgatcctggtccaggtggctgatgtcaatgacaacgcgccccgcttcaagcag
ccgtcctacacggtgtatctgacagaaaataacgcgccaggcgcctcgatctgcgcggtg
acggcgctggacccggattccggccagaacgcgtatatttcctattccgtacacgaaggg
gacatccaggggatgccggtgtccacttacgtgtcaatcaattccgacaacggcaacatt
tacgcactgagatctttcgaccacgagcagctgaaaaactttcagatcacggttcaagcg
caagacgccggcctcccgccgctcagcaacaacgtctcgatcgtcatcttcgttttggac
caaaacgacaaccccccagtgatcgtgtcaccggtttcgcgtaacggcacggcccccgat
caagcggtgcccaggtcggccgacgcgggccaccttgtgaccaaagtcagagccgtggac
gcggacgcgggacaaaactcgcgtctgctctaccaaatgatccaggcgacggatccaact
ctgtttagcgtcgctctgtacacgggtgaagtcaggaccatccgccagttggtggagaag
gaccccacgaggcacagactggtcatcctcgtgaaggacaatggtcagccggccctctcg
gccacagtctccatcagcctgtcagtggttgacagcctgccagagtcgaagcccgatcag
agcgacctgtcacagagctcgcgtcacagctccaacctcacgctgtacttaatcgtgtct
ctgggcgcagtctccttcacattcctggtggccatcatcgtcctggtggtggtgcagaga
ctcaagggcagaccgtccaacaagtccagtctccccttcatcccctcgctttgcggctgc
tgccggcgcacggagacgcgcgccaccacggaggtctttcggaaatccaacctgaacgtt
cggatggcttcgggcccggaggcggccggaagcggcccgatcccgcaggtgtactgctac
aaaatgtgcctgacgcccgagtccaaaaaacacgacttcatgttcttgaagccgtgcagc
ccggttctgtcggctcagcagaacaacgccaagagcacagattacctgacctctggctgg
agcaccctggaccgcagcgagctcgtcaagaaccgagccctgactccaaatgagcttaaa
tattccaacaaagactggacctggaccaagaaccagtgcaactctgcatacaagagatac
agctcaggaaacatggacgctgatggtctgacctgcagcgtagcgccacagtattggacg
tggggaaaccagaagaaagaacacagggcagctttccaagagggagcaggtccgaactcc
tcgtgggctcccaagtacacccagcctcagtgtgagcggcctgactaccagcacaacgtc
tacatcccaggcaccacgtccaactacagcatgctgaagatggcacccagaggggacctg
gatgtgtacaacacattctctacctttggaaagaaaaagaagtggtcacactatgaccag
tcatttgaaaggcaagaagacctgataagggatgccatctttaaatga
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integrated database retrieval system
