Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020374G001
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Entry
GSTEN00020374G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04080
Neuroactive ligand-receptor interaction
tng04082
Neuroactive ligand signaling
tng04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00020374G001
04082 Neuroactive ligand signaling
GSTEN00020374G001
04519 Cadherin signaling
GSTEN00020374G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00020374G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
GABA-A
GSTEN00020374G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-ProteinID:
CAG01567
UniProt:
Q4SCR5
LinkDB
All DBs
Position
7
AA seq
451 aa
AA seq
DB search
CSSSTGNSGMSVAKTTVDKLLKGYDIRLRPDFGGPPVIVGMSINIASIDSISEVNMDYTI
TMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLPDTYFLNDKKSFLHGVTVKNRMIRLH
PDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIVFFWQGGDNAVTGVD
KLELPQFSIVDIRLVSREVRFTTGSYPRLSLSFRIKRNIGYFILQTYMPSILITILSWVS
FWINYDASAARVALGVTTVLTMTTINTHLRETLPKIPYVKAIDVYLMGCFVFVFLALLEY
AFVNYVFFGRGPAQQPLAHASATADSLVSALPSQVDPYGNILLTTLEMNNEVMPSDVGSS
VSDSRNSVMSFDSSGVQFRKPMVPRDGFSHHSLDRSAMRSRANCRLRRRSSKLKLKIPNL
SDVSTIDKWSRVIFPITFGFFNLIYWLYYVN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
tgcagctcctccactggaaacagcggaatgtctgtggccaaaaccaccgtggacaagctg
ctgaagggttacgacatccgtctgaggcctgattttggaggtcctcctgtcatcgtagga
atgagcattaacatagcaagcatcgactccatctcagaagtaaacatggactacaccatc
actatgtatttccagcagagctggcgggataagcgtttggcctacggtgagctcaaacta
aacctgactctggacaaccgtgtagcagaccagctatggctccctgacacctacttcctt
aatgacaagaagtcgttccttcacggcgtgacagtaaagaaccgaatgatccggctgcat
cccgacggcactgttttatacggactgagaataaccaccactgctgcgtgcatgatggac
ctgaggaggtaccctctggatgagcagaactgcaccctggaaatagaaagctatggatac
accacggatgacatcgtcttcttctggcaagggggagacaacgctgtgactggagttgac
aagctagagttgcctcagttctctatcgtagacatccgcctagtgtccagggaggtcagg
tttaccacaggttcctatccaaggctttcgctgagtttcaggattaagagaaacatcggt
tacttcatcttgcagacttatatgccctccatcctgatcaccatcctctcctgggtctcc
ttctggatcaattatgatgcctctgcagctcgggtggccctgggagtgacaacggtgctc
accatgacaaccattaacacccaccttagggagacgctcccaaagatcccatacgtgaaa
gccatcgacgtctacctcatgggctgtttcgtgttcgtgttcctggccctgctcgagtat
gccttcgtaaactacgtgtttttcggccgcgggcccgcgcagcagccgctcgcccacgct
tcagccacggctgactcccttgtctctgctctcccctcgcaggtggatccgtacggaaac
atcctccttaccacgctggagatgaacaacgaagtgatgccttccgacgtggggagcagc
gtcagtgactctcggaattccgtcatgtcctttgacagctccggggtccagttcaggaag
cctatggtgccccgagacggcttcagccaccactcgctggacaggagcgccatgcggagc
agggccaactgtcggcttcggagacgctcctccaagctcaagttgaaaatcccaaacctg
tcagatgttagcaccatcgacaagtggtcccgggtcattttccccattacctttggattt
ttcaacctaatctactggttgtactatgtgaat
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