Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020681G001
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Entry
GSTEN00020681G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00020681G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
GSTEN00020681G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-ProteinID:
CAG01794
UniProt:
Q4SC38
LinkDB
All DBs
Position
14
AA seq
1398 aa
AA seq
DB search
MEAQLQSIFEDVVKTEIIEEAFAGMFMDTPEDERTKLITCLGAFRQYWVTLPLESHEQCV
QWIVRFIHSQHSPKRISFLYDCLAMAVETSLLPPRMVCAALISSDSLEWERTQLWALTFK
LIRKIIGGVDYKGVRDLLKAVLDKIQTIPTTVSSSIVQQLLAAREVVEYILDRNACLLPA
YFAVTEIRKLYPEGKLSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGAICNS
WKLDPSTLHFPLKGMLPFDKELFEPQTGLLRYVLEQPYSREMVCNMLGLNKQTLNIAQQK
QRCPVLEEQLVDLVVYAMERSESEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHM
VLSLHQKLAGRGLNKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVP
DITKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKTLGMSDY
KIALLCNAYSTNSECFPLPMGALVETIYGNGTMRINLPGTNCMASAAVTPLPMNLLDSLT
VHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIESLGIKGFISQLLPNV
FKCHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVESTALRL
ITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIHGTWC
KDILQTIMNFTPHNWASHTLSCFPAPLQVHLDSRQVRSDLPPPTDHYFPLVFCPQAFFKQ
NNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPPLFLCLLWKMLLETDHINQ
IGFRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRL
ILCLVSRNGGEASPVCAKNPVTSSLLFLQAMRSHENNEAQVCYFIIQLLLLKPNDFRNRV
NDFVKENAPEHWLQSDWHNKHMNYHKKYPEKLYFEGLAEQVSPPMQLQSQYLPIYFGNVC
LRFLPVFDIVIHRFLELLPVSKSLETLLDHLGSLYKFHDRPVTYLYNTLHYYERQLRDRT
NLKRKLVHAIMSSLKDNRSPGWCLSETYLKFGINPREDNVWIPDDTYYCKLIGRLVDNIL
HYSPSLNTLTHTHRCPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVV
LKSQPLVPRENITAWMNAIGLVITALPEPYWIVLHDRIVSVISSPALTSETEWAGYPFAL
LDFTACHQSYSEMNCSYVLALAHAVWHHSSIGQLSLIPNAGNISFHCPPGRFLSETLKPI
VQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCQHLSFMDPICDFL
YHIKYMYTGDSVKEQVGR
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcagctccagagcatttttgaagatgttgtgaaaactgagataattgaagaa
gcctttgctggcatgtttatggacaccccagaagatgagaggacaaaactcatcacttgt
ctgggagctttcaggcagtactgggtaacactacccctggaatcgcatgaacagtgtgta
cagtggatagtgcgatttattcacagccagcacagccccaaaagaatctccttcctgtat
gattgtttggccatggctgtggaaaccagtctgctaccacccaggatggtgtgtgcagct
cttattagctcagacagtttggagtgggagaggactcagttgtgggctctcacgttcaaa
ctcatacgcaaaatcattggaggagtggactataagggtgttcgagatctattaaaagca
gttttggataaaattcaaaccattcccacaacagtcagctcatctatagtccaacagctt
ttagctgcacgagaggtagtggagtatatactcgacagaaatgcttgtcttcttcccgcc
tattttgctgttacagaaatcagaaaactgtacccagaggggaagttgtcacattggctt
ctcggcagtttgatatcggactttgtggacagtttccggcccacagccagaatcaattca
atctgtggccggtgcagcctgttaccggtggtcaataacagtggggccatctgtaactcc
tggaagttggaccccagcactcttcactttcctcttaaaggcatgctgccatttgacaag
gagctgtttgagcctcaaactggtttgctgcgctatgtcttagagcaaccctattccaga
gaaatggtgtgcaacatgttgggactcaacaaacagactctgaacattgcccagcaaaag
cagcggtgcccggtgctggaggagcagctggtggacctggtggtgtacgccatggagcgc
tctgagagcgaggagcactttgacgctgacgtgggaggaaccagccagctgctgtggcag
cacctctcctcccagctcatcttctttgtgttgtttcagtttgcaagcttccctcacatg
gtgttgtctttgcatcaaaagcttgcaggaagagggctcaataaagggagggatcacttg
atgtgggtcttgctgcagttcatttctggaagcattcagaagaacgccctggcggacttt
ctgcctgtcatgaagttgtttgatctgctttatccagaaaaagagtgtattccagttccg
gacattaccaagccccagtcgacgcattctttcgccatgacctgcatctggatccacctg
aatcggaaagcccagaacgacaactccaagctgcagatacccatcccccactccctgaaa
ctccatcatgaattcctccagcagtcgctgcggaacaagacgctgggcatgtctgactat
aagatcgccctgctgtgcaacgcctacagcaccaactcggagtgcttccccctcccaatg
ggggcgctggtggagaccatctacgggaacggaaccatgaggatcaacctccccggcacc
aactgcatggcctcagccgctgtcaccccgctgccgatgaacctgctggattcactcaca
gtgcacgcaaagatgagtctcatccacagtattgctacgcgggtgataaagttagcgcat
gctaaatccagcatcgctctggcgcctgcgctggtggagacctacagcaggctcctggtc
tacatggagatcgaatcactgggcatcaagggattcatcagccagttgttgccgaacgtg
ttcaagtgtcacgcctgggggatcctgcacaccttgctggagatgtttagctacaggatg
caccacatccagccgcattacagagtccagctgctcagtcacctgcacagcctggctgct
gtaccccagaccaaccagaaccagctgcatctgtgcgtggagagcacggccctgcggttg
atcacagccttgggaagttctgaagtgcagccgcagttcacccgcttcctcagcgacccc
aagacggtcctgtcagccgagtcggaggagctgaaccgagccttgatcctcaccctggcc
agagccacgcacgtcacagatttcttcacaggctccgactccatccacggaacctggtgc
aaggacatcctccagaccatcatgaacttcacgcctcataactgggcctctcacacactg
tcgtgctttccagccccacttcaggtgcacttagactcccgtcaggtcagatcggatctc
cccccccccactgaccactacttcccacttgttttttgtcctcaggctttcttcaaacag
aacaacgtccctcaagagtctcgtttcaacctgaagaagaacgtggaagaggagtacaga
aagtggaaatccatggctaacgagaatgacatcatcactcacttttccatgcaaggctcg
cctccgctcttcctctgtctcctgtggaaaatgctgctggaaacggaccacattaaccag
ataggcttcagggtcctggaacgcatcggcgcccgtgcgctggtggcccacgtgcgaacc
ttcgcagacttcctcgtctatgagttttcaacatccgccggaggacagcagctcaacaaa
tgcatcgaaatactcaacgacatggtctggaagtacaacatcgttactctggaccgactc
atcctgtgtctggtgagcagaaatggtggagaagcatctcccgtgtgcgcaaaaaacccc
gtcacttcttcgctcctcttcctccaggcgatgcgtagccacgaaaataacgaggctcag
gtttgctacttcataatccagctgctgctgctgaaacccaacgacttccgaaacagggtc
aacgattttgtgaaggagaacgctcctgagcactggctgcagagcgactggcacaacaag
cacatgaattatcacaagaaatacccggagaagctgtactttgagggccttgctgaacag
gtcagcccgcccatgcagctccagtctcagtacctgcccatttactttggcaacgtgtgt
ttgcgctttctgcccgtcttcgacatcgtcattcaccgcttcctggagctgctccccgtt
tccaagtccctggaaacccttctggatcatctgggaagcctgtacaagttccacgaccga
cctgtcacctacctgtacaacacactccactactatgagcggcaactcagagacaggacc
aacctgaagaggaagctggtgcacgccatcatgtcttcgctgaaggacaaccggagcccg
ggctggtgtctcagcgagacctacctcaagtttgggattaaccccagggaggacaacgtg
tggatccctgatgacacctactactgcaagctgattggacgcctggttgacaatatcctt
cattactccccctcccttaacacgctcacacacacacacaggtgtcctttccccaactgt
gactggaggttcaacgagttccccaaccctgccgctcacgcgctgcacgtcacctgcgtg
gagctgatggcgctggccgtgccggggaaagacgtgggcaacgctctgctcaacgttgtg
ttgaaaagccaacctctggttcccagggagaacatcacggcgtggatgaatgccattggc
ctggtgataacagcccttcctgagccatactggatcgttctccacgaccgcatcgtgtcg
gtgatcagctcccctgcgctgacgtcggagacggagtgggcgggctaccccttcgccctg
ctggacttcaccgcctgccaccagagctacagcgagatgaactgcagctacgtgctagcg
ttagcacacgcagtgtggcaccactcatccatcggacagctgtcgctaattccaaacgct
ggcaacatctccttccactgtccgcctggcaggttcctgtcagagacgctgaagcccatc
gttcagacggagttccagctgctgtacgtgtaccacctggtggggcccttcctgcagcga
ttccagcaggagaggacacggtgcatgctggagattggggtggccttctatgagatgctc
caggcagtggatcaacactgtcagcacctcagcttcatggaccccatctgcgactttctc
tatcacattaaatacatgtacaccggggacagcgtgaaggagcaggtgggacgttga
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