Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020700G001
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Entry
GSTEN00020700G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00020700G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
GSTEN00020700G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
CAG01812
UniProt:
Q4SC20
LinkDB
All DBs
Position
14
AA seq
525 aa
AA seq
DB search
MKKWNWREGQRPQRRTGAGQYRGWRRGQRSTQEEQWYGQTESRPFRASRRRDENQSAAAS
SSSSSSSSSSSSSSSHPFSYCPFGLPSAVFPELPGFYFDPEKNRYFRLLPGHNNCNPLTK
EKLQEKEREKERQKMLAEDEKLRKKAPRRGLNSSLVLQKRHLGLVQLHSYCRQVHEVKVS
GMRRHKLEIQSTDNSNPNTDNFRLIVADSACERVFTVNDVSHGGCKYGIMSFSSSSRGSL
SVQMCDNLYFTNRKVNSICWASVNYPDSHVLLCLVGAADTPGCVSLLPASLFSNSNPGWD
QPGMLCSFKISSAWSCAWCLNPQFDKTFSTGLSHRVILKHAETGRTQTYSTGSDVLAQQF
AQRVPVLFNGCRSGEIFSIDLRQRGRRDHNWKASRFHQESAITSVRVLQDENYLLAADML
GQIKLWDVRVTKPVQEYKGHYNQHAYLPVHVCEPEGLLMAVGQDCYTRVWSLQDGHLLRT
IPSPYPSANDLIPSVVFSSKIGGCRGLPGLLMAVKHDLYYYPYNT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggaattggcgagaaggacagcggccacagcgacgaacaggtgctggtcag
taccgaggctggcgccgaggtcaaaggtcgacccaggaagagcagtggtacgggcagact
gaatcaagaccgtttagagcatctcgtaggagagatgaaaaccagtctgctgctgcttct
tcctcttcctcttcttcttcttcttcttcttcttcttcttcttctcatccattttcctac
tgtccttttggtttaccgtctgcggtgtttccagagctacctggtttttactttgaccca
gagaaaaaccggtattttcgcctgttgccggggcacaataactgtaatccgctgaccaaa
gagaaattgcaagagaaggaacgggagaaagagagacagaaaatgctggcagaggatgaa
aagctcagaaaaaaagcaccgagaagagggctgaattcctccttggtcttgcagaaaaga
caccttggcctggtacagctccactcctattgcagacaggtccacgaggtgaaggttagt
gggatgagacgacacaaactggaaatccagagtacagataacagcaaccccaacacggac
aacttcagactcatagtggcggactctgcttgtgagcgagtgttcacagtcaacgacgtg
tcgcacggaggctgcaagtacggcatcatgagcttcagcagcagcagccgaggatctctg
tctgtgcagatgtgcgacaacctctacttcaccaaccgcaaggtgaactccatctgctgg
gcctcggtaaactaccccgactcgcacgtcttactgtgcttggtgggagcggcagacacc
cctggctgcgtcagtttgctccccgcttccctcttcagtaattccaacccaggttgggac
caacccgggatgctgtgcagctttaagatctcctcggcctggtcttgtgcttggtgcctc
aacccccagtttgataaaaccttcagcacgggtctctctcatcgggtgatactgaaacat
gcagaaacaggccggacgcagacgtacagcactggcagtgatgttctggctcagcagttt
gctcagagggtgcctgtgctgtttaatggatgccggtcaggggaaatcttcagcattgac
ctacggcagcggggtcgcagggatcacaactggaaggccagtcgcttccaccaggagtcg
gccatcacctccgtgcgcgtcctccaggatgagaactacctgcttgctgctgacatgctg
ggccagattaagctctgggatgttcgggtgacaaagcctgtgcaggagtacaaaggtcac
tacaaccaacacgcctatcttcccgtccatgtctgcgaacccgaggggcttctgatggca
gtggggcaggattgctacacccgggtgtggagcctccaggacggccatctcctgaggact
atcccctcgccttacccctctgcaaacgacctgatcccaagtgtcgtcttctcctccaag
atcggcggctgcaggggcctccccgggctgctcatggccgtcaaacacgacctttactac
tacccgtacaacacc
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