Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020704G001
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Entry
GSTEN00020704G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04140
Autophagy - animal
tng04148
Efferocytosis
tng05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00020704G001
04148 Efferocytosis
GSTEN00020704G001
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
GSTEN00020704G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00020704G001
Membrane trafficking [BR:
tng04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
GSTEN00020704G001
Hops complex
GSTEN00020704G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8
zf-C3HC4_2
zf-RING_16
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
DUF1664
zf-RING_Vps41
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-ProteinID:
CAG01816
UniProt:
Q4SC16
LinkDB
All DBs
Position
14
AA seq
1009 aa
AA seq
DB search
MASILDEYEDSQNTRKSAQRNSRLSNTNIGIPHTGFVNVRLEEEKPIFNKQRVDFTPPEK
INHLVVCNNQLCMNLGKDSLLRIDLTKPDQRNQIELGRKDDSTVHRLFLDPTGSHLLIGL
STRECLYLNRNTQKVRSLSRWRGHLIECVGWNKQFGNETNTGPILVGTSQGAIFEAEISA
AEGSLFNTNPDQYFRQVHSLEEDGNPAPVCCLEVERGLENKDYIIATTRKRLFQFVGKVA
EGSEQQCFSSIFSQNQDQLPSFQEFPANMGYSEITFYTSKLRTLPKAFAWMMGNGVLYGQ
LDFVRPNSLLSDVQVWEYTSDIDISVNKPISIVLTQFHFLLLLHDRVKAICTLNGEVVYE
DVFPDKSGTLKKMIRDPVGGLVWIYTERAVFRYHVQREARDVWQMYMSMNRFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQKYFEEIALKFIEAKEEEALKEFLLKK
LSNLKQNERTQVTLLVTWLSELYLNRLGQLESDGNTVIIRETREEFRNFLSNPKHKECLY
NNRSTIYDLLASHGNVDDMVYFSVVMEDYERVISHYCQHDDYSAALGVLSKHCDPKLFYK
FSPVLMQHIPKKVVDAWVQMGKRLDPKKLIPALMNYSQRGSSQQINETIRYIEFCVYELT
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTQPSEIHYDLKYALRLCSEHGYLQACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELQKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICGSLEEYNQHIDELKQEMEEATESAKRIRQDI
QEMRNKYGVVDSQEKCASCDFPLLSRPFYLFLCGHMFHSDCLFQVSLKILSAGVSPFNIA
FKMDFYKFRLQEVTPQLSAYKQARLEELQKKLAATAQASKSRHRPVPKDEGDAASIGKGS
AVSSREQIKSDIDDIVASECVYCGELMIKSIDKPFIDPEKFEEEKSSWL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaattcttgacgagtacgaagactcgcaaaacaccagaaaaagtgctcagcgg
aacagccgcttatcgaacacaaacatcgggataccgcatacaggttttgtcaatgtcaga
ctcgaagaagagaaacccatattcaacaagcagagggtcgacttcacccctccagagaag
ataaatcatctcgttgtctgcaacaatcagctctgtatgaatctggggaaggacagcctg
ctgaggatcgacctgaccaagccagatcaacgaaatcagatcgagctgggaagaaaagac
gacagcacagtccacagactcttcctggaccccaccggctcgcatctgctcatcggcttg
agcacaagagagtgtctgtacctaaacaggaacacacagaaggtgcgtagtctgtcccgc
tggaggggccacctcatcgagtgcgtgggctggaacaagcagtttggcaacgagaccaac
acgggacccatcctggttggcaccagtcagggcgccatctttgaggcggagatctctgcc
gccgagggcagcctgttcaacaccaacccagaccagtacttcagacaggtccactcgctg
gaggaggacgggaatcctgcaccagtctgctgcctggaggtggagcgcggcctggaaaac
aaggactacatcatcgccaccacccgcaaacgcctgttccagtttgtggggaaggtggcg
gaggggtccgagcagcagtgcttcagctccatcttcagccagaaccaggaccagctgccc
agtttccaggagtttccagccaacatgggctacagcgagatcaccttttacacctcaaag
ctgcgcaccctcccaaaggccttcgcctggatgatgggaaacggagttctttatggtcag
ctagactttgtcaggcctaactcgctgttgagtgatgtccaagtgtgggagtacacctct
gacattgacattagtgtcaacaagcccatctccatcgtgctgacacagttccactttctg
ctgctgctccacgatcgtgtcaaagccatctgcaccctgaacggggaggtggtgtacgag
gatgtgttcccagataaatccggcactctgaagaagatgatcagggatccggtcggcggg
ttggtctggatctacaccgagcgggcggtcttccgctaccacgtccagcgcgaggccagg
gacgtctggcagatgtacatgagcatgaacaggttcgacctggccaaggagtactgccgc
gacaggcccgagtgcatggacatggtcctggccaaggaggccgagcactgcttccagaac
aagcgatacctggagagtgctaaatgctacgcgctaacgcagaagtacttcgaggagata
gctctgaagtttatcgaagccaaagaagaggaggcgctgaaggagttcctactcaaaaaa
ctcagcaatctgaaacagaatgagaggactcaggtcaccttgctggtcacctggctgtcc
gagctctacctgaatcggctgggccagctggagagcgacgggaacactgtcatcatccgg
gagacccgtgaagaattccgcaacttcctcagcaaccccaaacacaaggagtgcctctac
aacaaccgcagcaccatctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggttgtcatggaggactacgagagggtgatatcccactactgccagcacgac
gactacagcgccgccctgggcgtgctgtccaagcactgcgatcccaagctgttctacaag
ttctcccccgtcctcatgcagcacattcccaagaaagtggtggacgcctgggtgcagatg
ggcaagcggctggaccccaagaagctcatcccggctctgatgaactacagccagaggggc
agcagccagcagatcaacgaaaccattcgctacatagaattctgtgtgtacgagctgacc
gtgaccgaggaggccattcataactacctgctgtccctctatgccaaatacaagccagac
tctctgctgtggtacctggaacaagcgggcacgcagccctcggagatccactacgacctg
aagtacgcgctcaggctgtgttccgaacatggatacctgcaggcctgcgtgctggtctat
aggataatggagctgtacgaagaggccgtggaccttgctttgcaagtggatgtagacttg
gctaagtcttgcgccgacctgcctgaggatgatgaggagcttcagaagaagctgtggctg
aagatcgcccgccacgtggtgcaggaggagaaagatgtgaagaaggcgatgaactgtctg
tccagctgcaacctgctcaaaattgaagacatcctccctttttttccagactttgtgacc
attgaccattttaaggaggcaatctgcggctccctggaggagtacaaccagcacatcgac
gagctgaagcaggagatggaggaggccacggagagcgccaaacgcatcagacaagacatc
caagaaatgaggaacaaatatggcgtggtggattcccaggaaaaatgtgcctcctgcgac
ttccctttactcagccggccgttttatctgttcctgtgtggacacatgttccactccgac
tgcctttttcaggtatccttgaaaatcctatctgccggtgtgtctcctttcaatatcgcg
tttaaaatggacttttataaatttcgcctccaggaagtgacccctcagctgtcggcttac
aagcaagctcgcctggaggagctgcagaaaaagttagccgctactgctcaggcctcgaag
tctcgtcaccgcccggtccccaaagacgaaggagacgccgccagcatagggaagggcagc
gcggtctcgagccgtgagcagatcaaatccgacattgacgacatcgttgcctctgaatgc
gtctactgcggcgaactgatgatcaagtccatcgacaaacccttcattgacccggagaaa
tttgaggaggagaaatccagctggctgtga
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integrated database retrieval system
