Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020876G001
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Entry
GSTEN00020876G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04986
polycystin 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00020876G001
04040 Ion channels [BR:
tng04040
]
GSTEN00020876G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
GSTEN00020876G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00020876G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
Motif
Other DBs
NCBI-ProteinID:
CAG01935
UniProt:
Q4SBP7
LinkDB
All DBs
Position
18
AA seq
857 aa
AA seq
DB search
MSSSRVRPQQSPAARRPHRIHSGEGIEMENIQHQDLGLGGAIGTPSPPSRQAWSRDNPGF
EPEDAILEADWPPASPGRRSASTASGSSCSSGLGSFTGVGSSAQLPRGGLIPSPTVDPQQ
QESHQRRSCMKQILQKIRILWGTELMEDSDSSRERYLRNILREMITYIAFLVTVCILTYG
MVSANMYYYTKVMSQLFLDMPLSPGDPTTFRTLATMEDFWKFTEGPFLNGMYWEVWYNNQ
SLPENQSLIYYENLLLGVPRLRQVKVRNESCSVHQDLLGEALECYNLYSPSNEDTASFGP
KNGTAWVYATETEVNGSSHWGQVSKYGGGGYYQDLSPTREGSLVQLQLLKKCLWLDRGTR
AVFLDFSVYNGNINLFCIVRLLVEFPATGGVLTSWRFQTVRLIRYVSSWDYFVGVCEVAF
SLFILYYIVEEVLEIRIHRLHYFRSLWNCLDVLIILLSVVAVIMNITRTATVGNLLKGLL
ENHAAHPSFESLAHLQVQFNNVAAVIVFFSWVKVENASAAESVRTRHSNADPLCPSQLFK
FINLNKTMSQLTTTMSRCAKDLVGFAIMFFIIFLAYAQLAYLVFGTQVGDFSTFQASIFT
QFRIILGDFEFSEIEEASPVLGPVYFTTFVFFVFFILMNMFLAIINDTYSEVKADMSQQR
SEMEMTDFIKKEDLELERSSLTRPISGRSFPRTQEDSEEDDDEDSGHSSRRRGSSSGGVS
YEEFQVLVRRVDRMEHSIGSIVSKIDAVIVKLEAMERAKVKRRDVLGRLLDGVLEVRACT
DAFAVSRLTVPCLCCQDERLGRDADTHREQMERLVREELERWESDDMGSQVSHPSLTTPV
GTRPRPSSSMSTDGLDA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtcccgagtccgaccgcagcagagcccggcggccaggcggccgcacaggatc
cactccggcgaggggatagagatggagaacatccagcaccaggacctggggctcggggga
gcgatcggcaccccgtccccaccatccagacaagcgtggagccgagacaaccccgggttc
gagcccgaggatgcgatcctggaggccgactggcccccggcgagtcccgggaggaggtcc
gcgtccacggcctctggcagcagctgcagcagcggcctgggaagcttcactggcgtgggc
agcagcgcccagcttccccggggagggctgatccccagccccacagtggatccccagcag
caggagagccaccagcggcgcagctgcatgaagcagatcctccagaagatccgaattctg
tggggaaccgagctgatggaggacagcgacagcagccgtgaaaggtacctcaggaacata
ctgagggagatgatcacgtacatcgcgttccttgtcaccgtttgtatcttgacctacggg
atggttagtgctaatatgtactattacaccaaagtcatgtctcagctgttcctggacatg
ccgctgtcccccggggaccccaccaccttcagaaccctggcgactatggaggacttctgg
aagttcacagaggggccttttctcaatggcatgtactgggaggtgtggtacaacaaccag
agcctgccggagaaccagagcctcatctactacgagaacctcctcctcggggtgccacgg
ctgcggcaggtcaaagtccgcaacgagtcctgctccgtccaccaggacctcttgggcgaa
gctctggaatgctacaacctctacagcccgtccaatgaggacacggcctcctttggcccc
aagaatggaaccgcatgggtgtacgcaacagagacggaggtaaacgggagcagtcactgg
ggtcaggtgtccaagtacggaggtggggggtactaccaagatctgtctccaaccagagag
ggatcactggtccagctgcagcttctcaaaaagtgcctgtggctggacagaggaaccaga
gccgtgtttctggacttctccgtctacaacggaaacatcaacctgttttgtatcgtcagg
ttgttggtggagttccccgctaccggcggggtgttgacctcctggcggttccagacagtg
cgtctgattcgatacgtgtccagctgggactactttgtgggtgtgtgtgaggtggccttc
agtttgttcatcctgtactacatcgtggaggaagtgctggagatccgtatccaccgtctc
cattacttcaggagcttgtggaactgtctggatgttctcatcatcctgcttagtgttgtt
gccgtcatcatgaacatcaccagaacggccacggttggaaatctgctcaaaggtctgctg
gagaaccacgccgctcaccccagctttgagtctttagcccacctgcaggtccagttcaac
aacgtggctgcagtcattgtcttcttctcttgggtcaaggtagaaaacgcatctgctgca
gaatctgtccgaacccgccactcgaatgccgatcctctctgtccctcccagcttttcaag
ttcatcaacctcaacaagaccatgagtcagctgaccaccaccatgtctcgctgcgccaag
gaccttgtgggctttgccatcatgttcttcatcatcttcctggcgtacgctcagctcgcc
tatttggtgtttggaacccaagtgggcgatttcagcacttttcaagccagcatattcaca
cagttccgtatcatcctgggagactttgagttctcggaaatcgaggaggccagtccagtg
cttggacccgtctacttcaccacctttgtcttcttcgttttcttcattctcatgaacatg
ttcctcgccatcatcaacgacacctattcggaggtgaaggccgacatgtcacagcaacgg
tcggagatggaaatgacggatttcattaagaaggaggatttggagctggaacgcagctca
ctgactcgacccatcagcggtcggagcttcccacgaacccaggaggactcggaggaggac
gacgacgaggacagcgggcacagctctcggcgtcgtggcagcagctcaggcggtgtttcc
tacgaagaatttcaagtgctggtgagacgtgtggacaggatggagcactccatcggcagc
atcgtgtccaagatagatgctgtgatcgtcaagttagaagcgatggagagggccaaggtc
aagaggagagacgtgctgggcaggttgctggatggcgtcctggaggtgagagcttgtact
gatgcctttgcggtgtccagattaacagttccatgtttgtgctgtcaggacgagcgtctg
ggacgtgacgcagacacccaccgggagcagatggagaggctggtgagggaggaactggag
cgatgggagtctgacgatatgggctcacaagtcagccacccatcgctcaccactccggtt
ggaacccgaccccgtccgtcttcatccatgtccaccgacggcctcgacgcg
DBGET
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