Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020880G001
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Entry
GSTEN00020880G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00020880G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00020880G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
GSTEN00020880G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
HECT type E3
GSTEN00020880G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-ProteinID:
CAG01938
UniProt:
Q4SBP4
LinkDB
All DBs
Position
18
AA seq
1055 aa
AA seq
DB search
MLCWGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSN
GCGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTT
EAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP
QPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS
QKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQ
DGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAF
GGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHSFLLYSNEQS
LEYPEDFRVINIGNSISPINYERLNSWRLKMMCNKDSTVTNDINIQLSSTACWNASFLDQ
SDDAHFSTNPKIPGIDLNSVRMFFATLSTPAFSALLEQATKSFESVLIPQLPRSPPDVEA
MRIYLILSEYPALQDTKNYIRLTIPLAMAILRLDANPSKVLDNWWCFVDDGVFTRMVDIY
KSIVVFLLRGGKTLLLPISYENYFVATLRLLEKLHKVNLKAHHVEYNHFYIPDITSMVDI
QEDYLKWFLSKAQITDFPSVNLCAYPFLLNAQAKTTMLQTDAELQMQMAVSGANLHNVFM
LLTLEPQLARNPYLVLHVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFTFHNESNLL
WFSDKCFVEQKWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPTLEDLKELSPTEA
RSLQQLLDYENEDVEETFLLSFAITRENYGIIEVKELVPGGESISVDKNNRKEFVEAYLR
YIFSDSASEQYSAFSAGFLKVCGGEILSLFQPCELMAMVVGNSNYNWEVMEKNTVYKGEF
TATHPTVRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTMAEERYLPVA
HTCYNLLDMPRYQTKEILRCRLTQAVEQYEGFSLV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaaagcaaaagatgggcagctgggcattgaagtggagaggaattcg
atgtttgagcccagaaactgtaatgtgtttagtggcaggggcctgaaagaagcagtctgt
ggaggacagcattcagtattcctgttgcatgatgggagcgtgtacacctgtgggtccaac
ggctgtggacagttgggccacaataaaccagggacatccccagagcttgttggagctttg
gatactcagaggatcacgctggtttcatgcggtcaggcccattctatggctgtgaatgag
cagggccaggtgtttgcctggggagcaggcgatgggggccagctcggattagggaccacg
gaggcagctgttcggataccaaggttgatcaaaaggctgtgtgaccaccgaatagctcaa
gtgatgtgtggaaatcagcactgcattgcactttctaaagatggccagctgttcacctgg
ggtcagaacaccagcggtcagctcggcctggggaagggagagcccagcaagctgttcccc
cagcccctcaagtctctggcagggattcctctggcaaagatcactgcaggtggggaccac
agctttgccctctctctgtccggagctgtgtttggatggggcaagaacaaagctggacaa
ctgggtctcaatgacattcaagaccgtgctgtcccgtgccacatcaagtttctgaggtct
caaaaagtggttcacatcagctgtggagatgagcacacagcagctctcacaaaggtacgg
ataagatcagcttcacaatgttttaggacttcaggtggcagatgctctaatccgtttttt
tgtcagagaattgggtgttctcactcaacacgagtcactattctgctgtggctctttcag
gatggaggcctgtttacatttggtgacggctcgtgggggcaactgggtcacggctccacc
agcaatgagcttttaccccggcgagtgctggagctgatgggtactgaggtgtcccagatc
acctgtggcaggcaccacactctggcttttgcgccttcctctggggtggtttatgcattt
ggaggtaacagccatggtcagctcggcacaggagaactgagcgctgaaaaatgcctctac
cctgtgaagatcaatttgctgtctggaaataatcacagaacagactccaaaaaatactcc
gtgaccaaaatcacctgtggaggagaccatagctttttattgtactctaacgagcagagt
ttagaatacccagaagactttagagtgattaatatcgggaactcaatttccccaatcaat
tatgaacgattgaattcgtggaggttaaagatgatgtgcaacaaagattctactgtcaca
aatgacatcaacattcagctctcctccacagcttgttggaacgccagctttttggaccaa
agtgatgatgctcacttcagtaccaacccaaagatcccgggcattgatctcaactctgtc
agaatgttctttgctacactcagcactccagctttctctgcactactggagcaggccacc
aagagttttgagagcgtgctgatccctcagctgccgcgatccccccctgacgtcgaggcc
atgaggatttacctcattctgtctgagtacccagccctgcaggacaccaagaactacatc
cgcctcaccattcccctggcaatggccatcctgcggctggacgccaaccccagcaaagtc
ttagataactggtggtgtttcgttgacgacggcgtttttaccagaatggtggacatatat
aagagcattgttgtgtttttactaagaggaggcaagacgctgcttctgcccatctcctat
gaaaactattttgttgccacactgaggctgctggaaaaactccacaaggtaaacctgaag
gcccaccacgtggagtacaaccacttttatatccctgacatcaccagcatggtggacatc
caggaagactacctcaaatggtttctgagtaaagctcagataaccgactttccctcagtg
aacctgtgtgcctacccgttcttgctgaacgctcaagccaagacaaccatgctgcaaaca
gacgctgaactgcagatgcagatggcagtcagcggtgcaaacttacacaacgtctttatg
ctgctcaccctggaaccacagctcgccaggaacccttatttagtgctccatgtgatcttt
gacggcgaggaagctgtggatgcgggtggagtcacaaaagaattcttcctgctgctgttg
aaagagctcatggatcccatttatgggatgttcacctttcacaatgagtcgaacctgttg
tggttctcagacaaatgctttgtggagcagaaatggttccacctgatcgggatcatttgc
gggctggccatctacaactccacggtggtggatcttcactttcccctggccctctacaag
aagctgctggatgtgtcgccgacgctggaggacttgaaggagctgtcccccaccgaggcc
aggagtctacaacaacttctggactatgaaaatgaagatgtggaggagacattccttctc
agctttgctatcactcgagagaattatgggatcattgaggtgaaggaactcgttcccgga
ggagaaagcatcagcgtggacaaaaacaacaggaaggagtttgtggaggcctacctgcgc
tatatcttctcagactcggccagcgagcagtactccgccttctccgctggcttcctgaag
gtgtgcgggggggagatcctgtcgctcttccagccctgtgagctgatggccatggtggtg
ggcaacagcaactacaactgggaggtgatggagaagaataccgtttacaaaggtgagttt
acagccactcatcccacagtcagattgttctgggaggtttttcacgagttcccgctggag
aagaagaagcagttcctgcttttcctcacgggcagcgaccggattccgatccacggcatg
gagagcctgcgcatcgtcatccagtccaccatggcggaggaacgctacctgccggtggcc
cacacctgctacaacctgctggacatgccccgctaccagaccaaagagatcctccgctgt
cgcctcacccaggccgtggagcagtacgagggcttcagcctggtc
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integrated database retrieval system
