Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020946G001
Help
Entry
GSTEN00020946G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04145
Phagosome
tng04814
Motor proteins
tng05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00020946G001
09142 Cell motility
04814 Motor proteins
GSTEN00020946G001
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
GSTEN00020946G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00020946G001
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tng04812
]
GSTEN00020946G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
GSTEN00020946G001
Cytoskeleton proteins [BR:
tng04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
GSTEN00020946G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynein_IC2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-ProteinID:
CAG01990
UniProt:
Q4SBJ2
LinkDB
All DBs
Position
15
AA seq
703 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDRGVESGGASSAAHEDSDLERKRRE
AEALLQSVGITPDIPHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGDGNAG
PRTLHWDPDPSTLQLHSDSELIGRGAVRLAMSKVTQVDFVPKEMVSYCKETQTPTEAVGP
TDQKADEEEDEEITAPPAVEGAQEETEEQGEQQAEDTPKELTEEEKLQVLHSEDFLTFFE
RGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADEHWTKNRVVTCLDW
SPQVCDSVSYPELLVASYNNNEDAPHEPDGVALVWNMKYKKNTPEYIFHCQSEVMSAGFA
KFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVSVVGTQNANNLISI
STDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACR
HGSKAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKVRTLKPKVD
THGYIPAKLAPPFSLLQSTRPLYSFEDSCDYVYDAMWSPTHPALFACVDLAGRLDLWNLN
NDTEVPTASVYVEGGTALNRVRWAHSGKEIATGDSEGHVQVYDVGEVGWVLKQSPFSPSL
FLPSSVLVPRQQICVPKADEWTRFVRTLAEIAENRDEAEELAN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggctgagctggagaggaagaaacaacggatcgctcag
attcgagaggaaaaaaagaggaaagaggaggagaagaaaaagaaggaccgcggagtcgag
tctggaggtgcgtcttctgctgctcatgaagattctgacctggagaggaagaggagggag
gcagaggctctgctgcagagtgttggcatcacccctgacatcccccacgctcaacccctc
agggtagtaacagaggatacctgtctgtttcactacctagtccccgcccccatgtccccc
tccaacaaatcagtgggcagcgatgcaggaagccaagattctggagacggaaacgcagga
ccaaggactttgcactgggaccctgacccctctactctgcaactccactccgactctgag
ctcatagggcgtggggctgtgaggctggccatgtccaaggtcacccaggtggactttgta
ccgaaggaaatggtgtcctactgcaaggaaacgcagacgcccaccgaggctgttggtccc
accgaccagaaagcagatgaggaagaggacgaagagattaccgccccgccagcagtagag
ggcgcccaggaggagacggaggagcagggtgagcagcaagcggaggacactcccaaggag
ctgacagaggaagagaagctgcaggtgctgcactctgaagactttttgaccttcttcgaa
cgtggcagcagaattgtggagagagcgctggctgagcaggtggacgtctgctttgactac
agcggcagagacctggaggataaagagggggatctgcaggcaggagcaaagctggttctg
aaccgacagtttgcagacgagcactggactaagaacagagtggtcacctgtctggactgg
tcacctcaggtttgcgacagcgtgtcttatcccgagctgctggtggcttcctataacaac
aacgaggacgctccccacgagcccgacggagtggctctggtctggaacatgaagtacaag
aaaaacacccccgagtacatctttcactgccagtctgaggtgatgtccgccggctttgct
aagtttcaccccaacctggtggtgggggggacgtactctgggcagatcgtcctgtgggac
aatagaagcaacaagcgcacccccgttcagagaacccccttgtctgcagctgcacacacg
catcccgtctactgtgtcagtgtggtcggcacgcaaaacgccaacaacctgatcagcatt
tccacagacggcaaaatgtgttcctggagcctggacatgctgtctcagccgcaggacagt
ctggagttggtgttcaagcagagcaaagcggtcgccgtcacctccatggccttccccctg
ggcgacgtgaacaactttgtggtgggcagcgaggatggctctgtgtacaccgcctgccgc
cacgggagtaaggcaggcatcaccgaggtcttcgagggtcaccacggaccagtgaccggg
ctgagctgccacagcgccggagggcccgtcgacttctcccacctcttcatctcctcctct
tttgattggactgtcaaactttggagcacaaaagtgaggactttgaagcctaaagtagac
acacacggttatattcccgctaaattagctcctccgttttctctcctgcagagcacccgt
ccgctgtactccttcgaggacagttgtgattatgtgtatgatgctatgtggtctccaaca
cacccggctctgtttgcttgtgtggacctagcgggacgtctggacctgtggaacctcaac
aacgatacagaggttccgaccgccagcgtgtacgtggagggcgggacagcgctcaaccgt
gtcagatgggcccactctgggaaggagatcgccactggggactccgagggacacgtgcag
gtgtacgacgtgggagaggtaggatgggtgctcaagcagagtccgttttcaccgtccctt
ttcctgccctcatctgtccttgttcctcggcagcaaatctgcgtgcccaaggctgacgaa
tggacgcgcttcgtcaggaccctggccgagatcgccgagaatcgcgacgaagccgaagag
ctggccaac
DBGET
integrated database retrieval system
