Tetraodon nigroviridis (spotted green pufferfish): GSTEN00020949G001
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Entry
GSTEN00020949G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06485
integrin alpha 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04382
Cornified envelope formation
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04514
Cell adhesion molecule (CAM) interaction
tng04518
Integrin signaling
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00020949G001
04514 Cell adhesion molecule (CAM) interaction
GSTEN00020949G001
04518 Integrin signaling
GSTEN00020949G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00020949G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00020949G001
04810 Regulation of actin cytoskeleton
GSTEN00020949G001
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
GSTEN00020949G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00020949G001
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00020949G001
04090 CD molecules [BR:
tng04090
]
GSTEN00020949G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GSTEN00020949G001
Exosomal proteins of breast milk
GSTEN00020949G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin alpha subunits
GSTEN00020949G001
CD molecules [BR:
tng04090
]
Proteins
GSTEN00020949G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
CAG01993
UniProt:
Q4SBI9
LinkDB
All DBs
Position
15
AA seq
982 aa
AA seq
DB search
LLVGAPRAKALRGQTSSITGGLYRCDMDRDDCSRVEFDNMENPKAESKQMQWMGVSVSSQ
GPGGKVMTCAHRYQHLNNVGTNFEFRAIIGRCYVFSQDLSINPSSNEDGGNWLFCQGRSG
GHERFGSCQQGLSAIFDDEYHYFIFGAPGAYDWRGLVRLEHNNFTLLDMGFYDDGPFEVG
DEDAKDPNLVPTPPNSYLGFSLDTGKRLVKQDQLTVVAGAPRANHSGAVVLLRKGPDTSK
VMEKDYILEGEGLASSFGYALAVLDLNGDRWEDLVVGAPQYFEKEKEIGGAVYVYVNNQG
MWDKITPVRIDGPQDSMFGLAVANLGDINQDGYHGKATIFVLLSAGPFGGLIFFHSGSQI
LLWELRTIITVREKFSSFMGPSWHSSLRKLDSSSVFISLQVLTAKPGVKMFGYSLASNMD
LDKNSYPDLAVGSLSDEVFVYRARPVINVKKDIQLSTKEIDLTKKNCGNTFCLEVKACFS
YTANPRSYSPRLTVVYSLEADAENRKKGLISRAVFIEGATKSYNSRGTVVLNSQGMVECV
NRQLAIQENIKDKLSGIPIDVSVEIQDTKRKRRQSSFSQLPPVLDANVNNMVRSMVPFRK
EGCGNDNICQSNLALSYRYGYMAADDISFVPLELENGIPVIKLSNQKNVALEVNVTNLNG
DDAYEASMVAAFLSSLTYSEFRVPLNVSLKHPVSCTANKNGSLVDCELGNPFKRNSEAIF
YIIMGTSGISLDTNEVEVELKFETTSEQQALMAVKAKAKVAILLQLSVSGQALPSQAYFS
GKVIGEEAIKTESEMGSAITHRFKIINLGKSLTEAAVLEIDWPKETADEKWLLYLMNISL
SGVKQINCSPKGEINPRQKAPRSRRAAKNSLEGDKGTISRYTDEKKSQTLSCDQGAKCVK
IKCPLQFTESNAVITLHSRLWNSTFIEDFSKLHHVVVTVKASLNVDSSRNTVLHNAVTEV
SLQHLRRSGAQLLVLMRLCPTG
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
ctgctggttggtgccccgagagcaaaagctttgaggggacaaacatctagcataaccgga
gggctgtaccgctgcgacatggacagggacgattgctccagagttgaatttgacaacatg
gagaacccaaaggcagaaagcaaacaaatgcagtggatgggagtgtcggtcagcagccag
ggccctggaggcaaggtcatgacctgcgcccatcgctaccagcatttaaacaatgtgggc
accaacttcgaatttcgggcaattatcggccgctgctacgtgttcagtcaggacctgagc
atcaatccatcgtccaatgaagacgggggcaactggctcttctgccagggtcgttccggg
ggccacgagaggttcggatcatgccagcagggcctctccgctattttcgatgatgaatac
cactacttcatcttcggagctcccggagcttacgactggagaggtttggtacgtttggaa
cacaataacttcactttgttagatatgggcttctatgatgatggtccttttgaagtgggg
gatgaggatgcaaaggacccaaacttggtcccgacccctccgaacagctacctgggcttc
tccctggacacaggcaagcgtctggtcaagcaggaccagctgacagtggtggcgggagcc
cccagggccaaccacagtggcgccgtggtgttactgagaaaaggcccggacacgagcaaa
gtcatggaaaaagactacatcctggaaggggaaggcctggcctcctctttcggctacgct
ctggcggtgctggacctgaacggcgacaggtgggaggatttagtggtgggagcgccacag
tactttgagaaagagaaagagatcgggggagccgtttacgtttacgtcaacaaccaggga
atgtgggacaaaatcacgcccgttagaatagacggaccccaggactccatgttcggcctg
gctgtggccaacctgggagacatcaaccaggatggttaccatggtaaagccacgatcttt
gtgctactctccgctggtccttttggtggtctcatttttttccattctggctctcagatt
ttgctgtgggagctccgaacgataataacggtgcgggaaaagttttcatctttcatgggt
ccaagttggcactccagtctaagaaagctggacagttcaagcgtcttcatctccctccag
gttctgaccgcaaagcccggtgtcaaaatgttcggctactctttggcaagcaacatggac
ttggacaagaactcctaccctgacctcgccgtcggatctctttccgatgaagtgtttgtg
tacagggcccgtcctgtcattaacgtcaagaaggacatccagctctcgacgaaggaaatc
gacctcaccaaaaagaactgcggcaacacattctgtctggaggtgaaagcgtgcttcagc
tacacggctaaccccaggagctactctccacgtctgacggttgtgtattccctggaggcc
gatgccgaaaacaggaagaagggcctgatttccagagcggtcttcatcgagggtgctaca
aagagctataactccagggggaccgttgtgttgaacagccaaggaatggtggaatgcgtc
aatcgtcagctggccatacaggaaaacatcaaggacaagctgagcgggatccccatcgac
gtgtccgtggagatccaggacaccaagcgcaagcgcagacagagctcgttttcgcagctg
ccgccggtgctggacgcaaacgtgaacaacatggttcgatcgatggtgcctttccggaaa
gagggctgtggcaacgacaacatttgtcaaagcaatttggcgttgtcctatcgctacggt
tacatggcagctgacgacatcagctttgttccactcgaactggagaatggcatccccgtg
atcaagctgagcaaccagaagaacgtcgccttggaggtcaacgtcaccaacctgaacggc
gatgacgcctacgaagcctccatggtggccgccttcctgagctcgctcacctactccgaa
ttccgtgtccctctgaacgtgagcctcaagcacccggtgtcctgtacagctaataaaaat
ggttcccttgtcgactgtgagcttggaaacccctttaaacgaaactcggaggcgattttt
tatatcatcatgggcacgtccgggatttctctcgacaccaatgaagtggaggttgaactc
aagtttgagacaacgagcgaacagcaagcgttaatggccgttaaagccaaggcaaaagtg
gccattttgttgcagctctctgtctcggggcaagctcttccatctcaggcctacttctcc
ggaaaggtcataggtgaggaggccattaagacggagagtgaaatggggagtgccatcacg
catcgcttcaaaataataaatctgggaaagagcctgacagaagccgccgtcctggagatc
gactggccgaaggagacggcggatgagaagtggctcctctatctgatgaatatcagcctg
tcgggagtgaaacaaatcaactgctctcctaaaggggagattaaccctcgtcaaaaggca
ccaaggagtagaagagcagcaaaaaacagcctggaaggtgacaagggcaccatttcacgc
tatactgatgagaagaaatctcaaactttgtcctgtgaccagggggccaaatgcgtgaag
ataaagtgtcccctgcagttcacggagagcaatgcagtcatcaccctccactcccgcctc
tggaacagcaccttcattgaggacttttccaaattgcatcacgtggtggtgacggtgaag
gcctctctgaacgtggacagctccaggaacacagtgctgcacaacgccgtgaccgaagtg
agccttcagcacctccgtcggtctggtgcccagctcctggttctgatgcgtttgtgtccc
acaggttaa
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integrated database retrieval system
