Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021134G001
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Entry
GSTEN00021134G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tng03016
]
GSTEN00021134G001
Enzymes [BR:
tng01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
GSTEN00021134G001
Transfer RNA biogenesis [BR:
tng03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
GSTEN00021134G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
CAG02135
UniProt:
Q4SB47
LinkDB
All DBs
Position
undetermined
AA seq
242 aa
AA seq
DB search
MDEREQPPACAPAVGLSLCDSAPLLWRMEDLRSARARGLVGALLGSLPRTPRQNLRLGRP
LLLLPEEERLLSEEHAAAALPAHPQGGGGGGGGAAVELKVRQREEEQQRSYQEQRLLALE
DRKSALLRATTPPSTGAEAGWEQALQERLAAAQHDFRFPASALAVQLSTARAGLSHCAES
RAFLRAHWPVREHACRSSTRYQVFRDLRRRGFFLTSAGKFGGDFLVYPGDPLRFHAHFIA
VC
NT seq
726 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagagagcagccgcccgcctgtgctcccgccgtggggctcagtctgtgcgac
tcggccccgctgctgtggaggatggaggacctgcgctcggcccgggctcggggtctggtc
ggggccctgctcgggtcgctgccccggacccccaggcagaacctgcggctgggccgaccg
ctgctgctcctgcccgaggaggagaggctgctgagcgaggagcacgcggctgccgctcta
cccgcccacccccagggaggaggaggaggaggaggaggagcagcagtggagctgaaggtg
aggcagcgcgaggaggagcagcagagaagctaccaggagcagaggcttctggctctggag
gacaggaagtcggccctcctgcgggccacgaccccccccagcacaggcgcggaggcgggg
tgggagcaggccctgcaggagcggctcgccgccgcccagcacgacttccggtttcctgcg
tctgcgctggcggtccagctgagcacggcgagggcggggctgagccactgcgccgagtcc
cgggccttcctgcgggcccactggccggtccgagaacacgcctgcaggtccagcaccagg
taccaggtgttccgagacctgaggaggcgaggcttcttcctgacctcggccggaaagttt
ggcggagacttcctggtgtatccaggtgaccctctgcgtttccacgcccacttcatcgcc
gtgtgt
DBGET
integrated database retrieval system
