Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021412G001
Help
Entry
GSTEN00021412G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00021412G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00021412G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
CAG02328
LinkDB
All DBs
Position
undetermined
AA seq
232 aa
AA seq
DB search
MHGAQLSFRSPWASRTPSPTSDSDMGFDQNLSGDSSSPDGTRPKPRISLSSRGQSPDMTS
AGSVASCDGKAAGSEQRIRRPMNAFMVWAKDERKRLALQNPDLHNAVLSKMLGQSWKALS
ATDKRPFVEEAERLRVQHLQDHPNYKYRPRRKKTTKKLKRVEPGLLLHSLAQTGTSGLRL
CPGADSVSGGGFRDLQAGPGHLELESYGLPTPEMSPLDVLEDGAGESVFFPQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgcccagctgtctttcaggagcccctgggcatctaggacccccagccccacc
tcagactccgacatgggattcgatcagaacctttctggggactccagttcccctgatggg
acgagacccaagcctaggatttccctcagttcaaggggacaaagtccagacatgacctcc
gcaggaagtgtggcgtcgtgtgatgggaaggcagcgggcagcgagcagaggatccgaagg
ccaatgaacgccttcatggtgtgggccaaagatgagaggaagcgcctagccctgcagaac
ccagacctgcacaacgccgtcctcagcaagatgctcggacagtcctggaaggccctgagc
gccacagacaagcgtccgtttgtggaggaggcagaacgtctgcgtgtccagcacctgcag
gatcacccaaactacaaatacaggcctcggcgaaaaaagaccaccaagaagctaaagcgg
gttgagccaggccttttgctccacagcttagcccagactggcacatcgggcctcaggcta
tgtccgggcgcagacagcgtctccggagggggcttcagagaccttcaggctggcccagga
cacctggagctggagagctacggcctgcctaccccggagatgtctcctctggatgttctg
gaagacggggctggggagtcagtcttttttccccaa
DBGET
integrated database retrieval system
