Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021491G001
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Entry
GSTEN00021491G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09447
interferon regulatory factor 7
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04620
Toll-like receptor signaling pathway
tng04621
NOD-like receptor signaling pathway
tng04622
RIG-I-like receptor signaling pathway
tng04623
Cytosolic DNA-sensing pathway
tng05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
GSTEN00021491G001
04621 NOD-like receptor signaling pathway
GSTEN00021491G001
04622 RIG-I-like receptor signaling pathway
GSTEN00021491G001
04623 Cytosolic DNA-sensing pathway
GSTEN00021491G001
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
GSTEN00021491G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00021491G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
GSTEN00021491G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-ProteinID:
CAG02387
UniProt:
Q4SAE5
LinkDB
All DBs
Position
13
AA seq
475 aa
AA seq
DB search
MQSPPKPQFASWLIEQVETGQYLGLCYVGQNKFRVPWKHNSRKDCNDEDSKIFRVGPTSS
PCYIFVIPGDLCQSPEEGWGGWVVGSSDSSSTTEAAEAWAVASGKINDFPNDKARWKTNF
RCALNNLSERFKMVQDNSKNSDDPHKIYEIINTGYNYESLPTQDSEMIPDIYNIPVEHLP
LPSELNLLNNLKALDLGSQPAVEPWAEDYIQHCPAVLDTYPAVAEIYPQPLEEKPSPYEI
NPPQAILAVPPDICDLEISIHYRKKEMLKTTVRAPRLQLHYHSEAPELEANHHICFPPTD
GLLDHKQVEYTNRILNSIQKGLLLEVRDTGIYATRQDRCHVFASTSDPSTAHLEPSKLPQ
NNMVELLSFAKYVHELKLFRENNGGSPEYTINMCFGEKFPDGKALEKKLVTVKVVPLVCR
HFYEMAHLEGASSLHSSNVSLQISHNSLYDLIHSVFGLPEQQELVRPAAGFLPQT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcccccccaagccgcagttcgccagctggctcattgagcaggtggagacgggc
cagtatctgggcttgtgctacgtgggccagaacaagttccgagtgccttggaagcacaac
tccaggaaggactgcaacgacgaggacagcaagatattccgggtaggtcctacttcctct
ccttgctatatcttcgtaattccaggggacctctgccagagcccggaggaaggatgggga
ggttgggttgttggatcctctgatagcagctccaccactgaagcagctgaggcgtgggca
gtagcaagtgggaaaatcaacgatttccccaacgacaaggcccgatggaagaccaacttc
cgctgtgctttgaacaacctgtctgagcgcttcaagatggtacaggacaattccaagaat
tcagacgacccccataaaatctacgagattatcaacaccggttacaactacgaaagcttg
ccgacacaggattccgaaatgattccagatatctacaacattcctgtggagcacctaccg
cttccatcggagctcaacctgctcaacaacctcaaggccctggatctcgggagccagcct
gcagtggagccttgggcagaggactatattcaacactgtccggctgtcttggacacttat
cctgctgtagcggagatctacccgcagcctttggaagagaagccatctccgtatgaaata
aatcctccacaggccatccttgctgtgccgcctgacatctgtgacctggagatctccatt
cactacaggaaaaaagagatgctgaagaccacggtgagagcgccgcggcttcagctccac
taccacagcgaggcccctgaactagaggccaaccatcacatctgtttcccacccacggat
ggtctgctggatcacaaacaggttgaatacaccaaccgcatccttaacagcatccagaaa
ggactcctcctggaggtacgggacaccggcatctacgccacgaggcaggacaggtgccac
gtgttcgccagcaccagcgatcccagtacggctcatctggagcccagtaagctgccccag
aacaacatggtggagctgctcagctttgccaagtatgtgcatgaactgaaactgtttagg
gagaacaacggggggtctcctgaatacaccatcaacatgtgctttggagagaagttccct
gatggaaaagcgctggagaagaagctcgtcacagtcaaagtggtccctctggtttgccga
cacttttatgagatggcccatttggagggagcgtcatctctccacagctccaacgtcagc
ctgcagatctcacacaacagcctctacgatctcattcactccgtgttcggcctgccggag
cagcaggagctggtgaggcctgctgcgggttttctgccgcagacctga
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