Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021792G001
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Entry
GSTEN00021792G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14313
nuclear pore complex protein Nup53
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00021792G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00021792G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00021792G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
CAG02637
UniProt:
Q4S9P5
LinkDB
All DBs
Position
2
AA seq
293 aa
AA seq
DB search
MELQVGTEPMTLGSPTSPKLAPGAQFLPGFLMGDLPAPSTPQPRVFNLSTSFTDSPGTLG
GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXGVHQACLSPAQVDPFYSQGESLSSDDRLDQSWVTVFGFPPASASYILLQFAQYGNILK
HTMASPGNWMHLQYQSKLQARKALSKDGKVFGDTIMVGVKPCIDKSVMDSSATVSSPHCS
SSTVQQFTSRSTIRPLSASYRSSSSDYQVVTDRQTPRKDDSFVSKAIEYMFGW
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaattgcaagtagggaccgagcccatgactctaggctcacccacctctccaaaactg
gcccctggggcacagtttctgcctggatttctgatgggggaccttccggccccaagcacc
ccccaaccacgtgttttcaatctgtccacatcttttactgacagccccgggacacttgga
ggaggaggaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnncaggtgtgcatcaggcatgtctgtctccagctcaggtggatcccttttatagtcag
ggagagtcgctgtcatctgacgatcggctagaccagtcctgggtcactgtgtttggtttt
cctccagcctctgcctcctacatcctgctgcagtttgctcaatatggaaacatactcaaa
cacacgatggcatcgcctgggaactggatgcacctgcagtatcagtcaaaacttcaagcc
aggaaagctttgtctaaagatgggaaagtgtttggtgacaccatcatggtgggagtcaaa
ccctgcatagacaagagtgtgatggacagcagtgccacggtgtcctccccccactgtagc
tcctccactgtccagcagttcacttcccgctcaaccattagacctctcagtgcaagctat
aggagctccagcagtgactaccaggtggtgacagacagacaaacacccagaaaagatgac
agttttgtttccaaggcaatagagtacatgtttggctggtga
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