Tetraodon nigroviridis (spotted green pufferfish): GSTEN00021909G001
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Entry
GSTEN00021909G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00021909G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
GSTEN00021909G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-ProteinID:
CAG02731
LinkDB
All DBs
Position
undetermined
AA seq
2163 aa
AA seq
DB search
SSYVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPMLFPVTEEDPILCSFSRCLK
ADVLSVWRRSQRQGRRELWLFWWGDDPNFADLIHHELAAEDDGLWENGLSYECRTLLFKA
IHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGDSNVCTSVEINQ
HQPVYHLTEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFYPI
SSKAKEGASEDKLEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDVPVAAPVGSSQC
SAVYSSGHQVPATQREPAMSLVTLTPPTSPEEAPTLDAHTAQKWVKMPSTSDLFSLDRTS
HHGGKIPQRLATQMVERVWQECNINRAQNKRKFSASANGTCEEDLKEKVGSWNFVEHSRR
SYCSCSRYKSMKQRASGTPGQAQSAGQPSQPPSKHKTGEGKADKVDKQQKRPQTPFHHRS
LTSDDASMETEATAGQRLTMRAPDPGGRFAGMRSADMSAIPKAPQLHSGVVSGGPSEQTN
SPQPPPLSPHPCERNDESGEVAKNPPSPNSQHFYQPPPEPCLVGVKAVGSSEEHGGPETL
SQHFHSHHPNPGSSSFSEPPEPTVYVGAGVHLEDDGLHTPWRLFKLPHGKEADPPTPLLP
GDKLRDEASGFHDSLVTATEAMSTTFKRHLKVSEERIQMYLARKNQYLVACADRRRSRAR
GGPLRPLKRETSNSLSPTKKTRRAASASLARSRRAMSTTFKRHLKVSEERIQMYLARKNQ
YLCAALTDGDHEPEVDPYAFEEGDVKFTFSNKKDKTGGEREPGKKQKSEDEGAGPADDAQ
RGAAHNRMASTSLIHETDLVVSINDLDNLFNSDEDDLASEDEGAGPADDAQRGAAHNRMA
STSLIHETDLVVSINDLDNLFNSDEDDLAVSRDPQLPKTKNGTDDRFSGKEQKPSTLDPV
SCINESTGIINPLLSFLLGSADLHQMFPTPPSLEQHIMGYSPMNMCSKEYGSMEASSGMT
TLDSTSSLGGHFKIEVEESFCSPKPSEIKDYSFVYKPELCQAFVGCSMFAPLKTLPSQCL
APIKIPEECVYRPSWTMGRELLNPVPVMTFLNKDSVGSAMDQDYTQTYTPQTHTPFMSNS
APPSNSGTGILPSPATPRFSAPTPRTPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTC
RPLNSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYL
SDPIGEAQEPCSCGFSSVVNRRYGNGCGLFLEDELDIIGRGSDISREAEKRFEELRSSSL
ERAGAGRSEHVPDEIILLLQDQCTIPFSPILSLEQDPVARGPHGALVPPCVRVEERDYCS
DCYMALEHGRQFMDNMSGGKVDEALVKSTCLHKWTKQNAVDVSALCSQDVLHVLLSLQPL
LQDAIQKKKTVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLS
PFGLPYWEKLLLDPFGSQRDIGYLVVCPDSEALLGNAKSFFRDLTAVYESCRLGPAPAHF
QRAHPDGMVLVGTQRCQDPHGDQPVSDWFLKAAGTNSDAFTRLKLYAQVCRHNLAPYLAS
QALDSSLLTQPFPSSNQSSSTQTPSSASSQQGPGNTGGASVPSSSASGTRQRLCVLRQPD
DISGSARQRDALIEADHFPTVRTLEREKVGVPTDGESHAIAYPPAIVVYIVDPFSYDEAN
GAAGPVPTHSSVWTLGLYAATLRCFSFYHLISAILYLYRQADGAGGDFGEASQKYNVLFV
GYCLSHDQRWLLATCTDLYGELLETGIINIDVPNRARRKKGSARRLGLQKLWDWCLGLVQ
MTSVPWRVVIGRLGRIGHGELKDWSILLSRRNLQSLSRRLKEMCRMCGISASDTPSILSV
CLVAMEPQGSFFIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSAFVQVA
SSSYTNIDTNIDILNATTDGSDAIGIFDLLDQENELVDPDIINISPTTSPVHSPGSHYHH
GGDGIKGQSTDRMESHEEVPNLLQQPLALGYLVSTVKAGPLPDWFWLLCTSTVSSVQSDE
LLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQLYNFIM
NML
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
agttcttatgtaccaaacggggccagcttggaggattgccattccaatctattctgtctg
gctgatctgacggggatcaaatggaagaggtttgtgtggcagggtcccacttcggcgcca
atgctgttcccggtgacagaagaggaccccatcctgtgcagcttcagccgctgcctgaag
gcggatgtgctaagcgtgtggcggcgcagtcagcggcagggccggcgggaactttggctc
ttctggtggggggatgatccaaactttgctgatctcatccaccatgagcttgcagctgaa
gacgacgggctttgggagaacggtctctcctacgagtgccgcacgctgctgttcaaagcc
atccacaacctgctggagcgctgcctcatgaatcgcagctttgtccgcattgggaaatgg
ttcgtgaaaccctacgagaaggacgagaagcctattaataagagcgagcatctttcctgc
gccttcaccttcttcttgcacggcgatagcaacgtctgcaccagtgtggagatcaaccag
caccagcccgtgtaccatttgacagaggagcatctcactctggctcagcaggcatccagc
cccttccaagtgattctgagtccgtttggtctgaacgggaccctgaccggccagtctttc
aagatgtctgacccgccgacccagaagctgatagaggaatggaaccagttctaccccatc
agttccaaagcaaaggagggcgcctctgaggacaaactggaggacatggactgggaggac
gactcgctggcctctgtggaggttctcgtaggcggcgtacggatggtgtacccagcgtgc
ttagtactggtgccccagtcagacgtccccgttgcggcccctgtggggtcctcccagtgc
agcgctgtctactcgagtggccaccaagtgcctgcgacccagcgagagcccgccatgtct
ttggtgaccctcacccctcccacttcacccgaggaggcaccgacattggacgctcacacg
gcccaaaagtgggttaagatgccttcaacttctgacctcttcagcctggacagaacaagt
caccatggaggcaagatcccacaacgactggccactcagatggtggagcgagtttggcaa
gagtgcaatatcaaccgagcccagaacaaacggaagttctccgcttcagctaatggtacc
tgtgaggaggacctgaaagaaaaagtggggtcctggaactttgtggagcattcgagaaga
tcttactgcagctgttccagatacaagtcgatgaagcagcgagcgagcggtactccaggc
caggcccagtcggcggggcaaccctcccagcctcccagcaagcacaaaacgggggaaggg
aaggctgacaaagtggacaagcagcaaaaaagaccccagacgcctttccaccatcgcagt
ctgaccagcgatgacgcttccatggaaacagaagcgacagctggccagaggttgaccatg
agggccccggaccccggaggaaggttcgccggcatgcggtctgctgacatgtccgccatc
ccgaaagcgccgcagctccacagcggggtggtcagcggcgggccctcggaacagaccaac
tcgccccagcccccgcccctcagcccccacccctgcgagcggaacgacgagtcgggggaa
gtcgcgaagaatccaccgtcccccaacagccaacacttttaccagccgcccccggagccc
tgcctagtcggcgtaaaagccgtcggcagcagcgaagagcacggcgggccagagactctg
agtcagcacttccattcccatcaccccaacccaggaagttcttccttctcggagcccccc
gagcccacggtctacgtgggcgcgggagtgcacctggaagatgacggcctgcacaccccg
tggaggttgttcaagctgccccacgggaaagaagccgacccgcccacaccgctgctcccg
ggcgacaagctgagagacgaggcctcgggatttcacgacagcttggtcaccgccacagag
gcgatgtcaaccacattcaagcggcatttgaaagtttccgaggaacgcattcagatgtac
ctcgccaggaagaaccagtaccttgttgcgtgcgctgacagacggcgatcacgagccaga
ggtggacccttacggcctttgaagagggagacgtcaaattcactttctccaacaaaaaag
acaagacgggcggcgagcgcgagcctggcaagaagcagaagggcgatgtcaaccacattc
aaacggcatttgaaagtgtccgaggaacgcattcagatgtacctcgccaggaagaaccag
tacctgtgcgctgcgctgacagacggcgatcacgagccagaggtggacccttacgccttt
gaagagggagacgtcaaattcactttctccaacaaaaaagacaagacgggcggcgagcgc
gagcctggcaagaagcagaagtctgaagatgaaggagcaggtccagccgatgatgctcag
cggggagctgctcataacaggatggcttccaccagcctcatccacgagacggacttagtg
gtgtcgataaacgacctggacaacctcttcaactcggatgaggacgatctggcgtctgaa
gatgaaggagcaggtccagccgatgatgctcagcggggagctgctcataacaggatggct
tccaccagcctcatccacgagacggacttagtggtgtcgataaacgacctggacaacctc
ttcaactcggatgaggacgatctggcggttagtagagacccgcagctcccaaaaaccaag
aatggaacagatgatagattcagtggcaaggagcaaaagccatccactttagaccctgtg
tcttgcatcaatgaatctacaggcattattaaccctttgttgtcgttccttttaggttct
gcagacctacatcagatgtttcccacaccgccctccttagagcagcacatcatgggctac
tcacccatgaacatgtgcagcaaggaatatggcagcatggaggccagttcaggcatgacc
actctggacagcacatcttctcttggaggccactttaaaatcgaggtggaagagagcttc
tgcagccccaagccatctgagatcaaggactattcgtttgtgtacaagcccgagctgtgt
caggcgttcgtgggatgctccatgtttgcccctctgaagacgctgcccagccagtgtctc
gcacccatcaagataccggaggagtgcgtctacagacccagctggaccatgggcagagag
ctgctcaaccccgtgcctgtcatgaccttcctcaataaggacagtgtaggcagtgccatg
gaccaggactacacccagacctacacccctcagacccacacacccttcatgtcaaatagc
gctccaccaagtaacagcgggacgggcattctgccctcgcctgcgacgccgcgtttctcc
gcaccgacgccacgcacgccgcgcaccccgcggaccccccggggtccctccagcgtccag
ggctcgctcaagtacgagaactccgacttgtactcgccggcgtccacgccatccacttgc
cgacccctgaattcggtcgagccggccacggtcccgtccattccggaagcgcacagcctc
tacgtcacgctcattctctccgagtccgtgatgaacctcttcaaagactgcaacttcgac
agctgctgcatttgcgtgtgcaacatgaacatcaaaggagccgacgtgggcgtgtacctg
agcgaccccatcggcgaggcccaggaaccctgcagctgcggcttcagctcagtggtcaac
cgacgctacggcaacgggtgcggcctcttcctggaggacgagctggacatcatcggccgc
ggctccgacatcagccgggaggcggagaagcggttcgaggagctgcggtcgtcctcgctg
gaaagagccggagccgggaggtcggagcacgtccccgatgagatcattcttctcctccag
gatcagtgcacgatccccttttcccccatcttaagcctagagcaggacccggtggcacgg
ggcccacacggggctctcgtaccaccctgcgtgagagtggaggagagggattactgtagt
gactgttacatggctcttgagcacggcaggcagttcatggacaacatgtcaggtggaaaa
gtggacgaggcactagtcaagagcacctgcttgcacaaatggaccaaacagaatgcggtg
gacgtgagtgcactgtgctcccaagacgtgctgcatgtgctgttgtcactccagcctctc
ctgcaggacgccattcagaagaagaagaccgtgaggtcctggggcgttcaggggcccctt
acctggcagcagttccacaaaatggctggacggggttcttacggtacggatgagtccccg
gagccgctgcccatccccactttcctggtgggctacgagtatgactttgtggtgctgtct
ccgtttggtctgccctactgggagaagctgctgcttgatcctttcggctcccagcgggac
atcggttacctggtggtttgtcccgacagtgaggctctgctcggcaatgccaagagcttc
ttccgagatctcacggctgtctacgagtcatgccggcttgggccagcaccggcccatttc
caaagggctcatcccgacggcatggtccttgttggtacgcagcgatgccaagaccctcat
ggggatcagccagtcagtgattggttcctcaaggctgctggcaccaacagcgacgccttc
acaaggcttaaactctatgcacaagtgtgccgacacaacctcgctccgtacctcgcatcc
caggcattggacagttcccttttgacacagccttttccctcatccaaccagtcgtcgtcc
acacaaacgcctagctccgcctccagccagcagggcccagggaacacaggaggcgcctcc
gttcccagcagcagcgccagcggtacccgtcaacggctctgcgtcctccggcagcctgat
gacatcagcgggtcagcccggcagcgggatgccctcatcgaagccgaccactttcccacc
gttcgcactttggaacgagagaaggtcggcgttcccacggatggcgagtcccacgccatt
gcatatccacctgccattgttgtttacattgtggacccgtttagctacgatgaggctaac
ggggccgcgggcccagtgccaacccattccagcgtgtggacgttgggtttgtacgctgct
accttgagatgcttcagtttctaccacctcatatccgcaatattatatctgtacagacaa
gcagacggagctgggggagacttcggggaggcgtcccagaagtacaacgtcctgttcgtg
ggatactgtttatctcacgaccagcgctggctcctggctacctgcaccgatctgtacgga
gagctgctggaaaccggcatcataaacatagacgtacccaacagagcgcggaggaaaaag
ggctccgctcggaggctcggcctgcagaagctgtgggattggtgcttgggcttggtgcag
atgacgtcggtgccgtggagggtcgtgattggccgactgggaagaataggccatggagag
ttaaaggattggagtattctgctgagcaggaggaacctccagtctctgagtcgccggctg
aaggaaatgtgccggatgtgcggcatctcggcctcggacactcccagcattctcagcgtg
tgcttggtcgccatggagcctcagggatcctttttcatcatgccagactctgtgtcaaca
ggttccgtgttcggtcgcagcaccacgctgaacatgcagacgtcccagctgaacaccccg
caggacacctcctgcacccacatactggtcttccccacctccgccttcgttcaagtggcc
agctccagctacaccaacatcgacactaatatcgacattctcaacgccaccaccgatggg
tcagacgctatcgggatctttgacctgctggaccaggaaaatgagctggtggacccggac
atcatcaacatttcccccaccacgtcgccggtgcactccccgggttcgcattaccatcac
ggaggagacggcattaagggccagagcacagatcgtatggagtcccacgaagaggttccc
aacctcctgcagcagcctctggccctcggctacttggtgtccacggttaaagctggcccg
cttcctgactggttctggcttctttgcacctccacggtgtcttcagtgcaatcagacgag
ctcctgcacagcaaacactcccaccccctcgactccaaccagacctcagacgtacttaga
tttgtgctggagcagtacaacgccctctcctggctgacctgtgacccagcaacgcaggac
cggcggtcgtgtctgcccattcactttgtggtgctgaaccagttgtacaacttcatcatg
aacatgttgtga
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integrated database retrieval system
