Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022058G001
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Entry
GSTEN00022058G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00022058G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GSTEN00022058G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7885
LRR_4
F-box-like
LRR_6
F-box
LRR_At5g56370
LRR_RPS2
LRR_EndoS
LRR_8
F-box_4
Motif
Other DBs
NCBI-ProteinID:
CAG02834
UniProt:
Q4S948
LinkDB
All DBs
Position
3
AA seq
464 aa
AA seq
DB search
MFTNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRSWNVLALDGSNWQRIDLFNFQ
RDIEGRVVENISKRCGGFLRKLSLRGCLGVGDSALRTFAQNCRNIEILSLNGCTKITDST
CNSLSKFCPKLKHLDLTSCTSITNLSLKALGEGCPLLEQLNISWCDQVTKDGIQALVRSC
PGLKSLFLKGCTELEDEALKHIGAHCPELVTLNLQTCSQFTDEGLITICRGCHRLQSLCV
PGCANITDAVLHALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQVKA
SGVPQLLGEGNESSVNACSCIRSQMQHSYSCPSTVLVYKSCFDEHMLLANEAATVFLQSL
SHCELITDDGIRHLGSGPCAHDHLEAIELDNCPLITDASLEHLKSCHSLDRIELYDCQQI
TRAGIKRLRTHLPNIKVHAYFAPVTPPPSVGGSRQRFCRCCVLL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccaacagtgacgaggcagtcattaataagaagctacccaaggagctgctgcta
cgaatcttctcctttctggatgtggtgaccctctgtcgctgtgcccaggtctcacggtcc
tggaatgttttggccttggacggcagcaactggcaacgaattgacctttttaactttcag
agggacattgagggtcgggtggtggagaatatctcaaagcgctgtggtgggttcctgagg
aaactgagtctgcggggttgcctcggagtgggcgacagcgccctgagaacgtttgcacag
aactgcaggaacatagagattctaagtttaaatggctgcacaaagattaccgacagcacg
tgtaatagcctcagtaaattctgcccaaagttgaagcacctagacctcacctcctgtacc
tcaatcactaacctgtccctcaaggctctcggtgagggttgtcccctgttggagcagctc
aacatctcctggtgtgaccaggtcaccaaggacggcatccaggcgctggtgcgctcctgc
cccggactcaaaagcctttttctcaaaggatgcactgagcttgaggatgaggctctgaaa
catatcggggctcactgcccagagctggtcacgctgaacctgcagacgtgctcacagttc
acagatgagggactcatcaccatttgccggggttgtcaccgtctgcagtctctgtgtgtg
ccgggctgtgccaacatcacagacgccgtcctgcacgccctggggcagaactgtcctcga
ctcagaattttagaagtggctcgctgctctcagcttacagatgtgggcttcactacgtta
gcaaggaattgtcacgagcttgaaaaaatggatttagaagaatgtgtgcaggtaaaagct
tcaggggttccacagctcctgggtgaaggcaacgagtccagcgttaatgcttgttcttgt
atcagatcacagatgcaacactcatacagttgtccatccactgtcctcgtttacaagtcc
tgttttgatgagcacatgctgttggctaatgaagctgcaactgtgttcctgcagagcttg
tctcactgcgagctgatcactgatgatggcatcagacatcttggcagcggcccctgcgcc
catgatcaccttgaggcgatcgagttggacaactgtcccctgatcacagatgcttccctg
gagcacctgaagagctgccatagtctggatcgcattgagctctacgactgccagcagatt
actcgtgccggcatcaagagactaaggacccatctgcctaacatcaaagtgcacgcatat
tttgctcccgtcactccacccccttcagtcgggggcagccgtcagaggttttgccgctgc
tgtgtactgcta
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