Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022125G001
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Entry
GSTEN00022125G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00022125G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00022125G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00022125G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00022125G001
Coactivators
SAGA/TFTC/STAGA complex
GSTEN00022125G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
GSTEN00022125G001
STAGA complex
GSTEN00022125G001
TFTC complex
GSTEN00022125G001
SAGA complex
GSTEN00022125G001
SLIK complex
GSTEN00022125G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-ProteinID:
CAG02888
UniProt:
Q4S8Z4
LinkDB
All DBs
Position
7
AA seq
599 aa
AA seq
DB search
MAEERRQKQCSVVLPTESMKAMAESVGVGQLQEESCVALSEEVSYRIKEIAQDALKFMRH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGMQPAIPENPPPVPKEQQKVESTEPLKVVKPGQEEDGTIQG
KAQGATAADGKGQKGEGPDTVEAAQTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIA
TDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPA
VVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSLLDDK
TQWTTRYGCIAGLAELGPDVIKTLILPRLSVEGARIKAVMEGQVVSNIDKIGAEHVQSLL
LKHCASVIAKVRSPPDSVEHYRTDYGYLGPMLCSHVIKARTQAALQAQQVNRTTLTITQP
RPTLTVSQSGLSGSSGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPAAKYIVMATSAGPAS
TQQVITISSSQSASPVTSTVPSATSTLQPLVKLESGSGPGLTASRPMQKYIVVSLPSTA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgacggcagaaacaatgttccgtggtcctgccaacggagtccatgaag
gccatggcagagtctgttggagtgggacagttgcaggaggaaagctgtgttgccctgagt
gaagaagtcagctacagaataaaagagattgcacaggatgcactcaaattcatgcgtcat
gggaagagacgtaaattaactaccagcgacatagataatgctctcaaactaaaaaacgta
gagcctctgtatggctttcagtcacaagagtttatcccctttcgctttgcgagcggtggt
ggaagggagcttcatttttacgaggaaaaggaagtcgacctgagtgatatcattaacact
ccccttcccagagttccactagatgtatctctaaaagcccactggttaagtattgagggg
atgcagcctgctattccagaaaatccgccaccagttccaaaagaacaacaaaaagttgaa
tcaactgagcccctgaaagttgtcaaacctggtcaggaggaggacggaacaatccaaggc
aaagctcaaggggcaacagctgcagatggaaaaggtcagaaaggagaagggcctgatacg
gttgaagccgcgcagactcatgagctttctgttgaacagcagctctactacaaggagatc
acagaggcatgtgttggctcctgtgaagctaagagagctgaagctctccagagtattgct
actgatcctgggttgtatcagatgcttccaagattcagcacatttatatctgaaggggtt
cgtgttaatgtggtgcaaaacaacctggccctactgatttacctgatgcggatggtcaaa
gctctgatggacaaccccaccctgtatttggagaaatatctacatgagctcatcccagct
gtggtgacgtgcatcgtcagcaagcagctgtgcctgcggccggatgtcgacaaccactgg
gctctgcgcgactttgctgctcgcctcatggcccagagctgtaaaaccttcagtaccaca
accaacaacatccagtcccgaatcaccaagacttttaccaagagtttgctggatgacaaa
actcagtggacaacgcgttatggctgcatcgctggacttgctgaactcggacctgatgtt
attaagacgttgatccttcctcggctttctgtagagggtgctcgcatcaaagccgtaatg
gaaggacaagtggtctccaatatcgacaagataggagcggaacatgtccaaagcctctta
ctgaaacactgtgcaagtgttattgccaaggtccgatccccacccgacagtgtggagcac
tatcggacagactatggttacctgggacccatgctgtgctcccatgtaattaaggccagg
actcaagctgccctgcaggctcagcaagtcaacagaaccaccctaacaatcacccagcct
cgtcccactctcacagtctcgcagagcgggttaagcggttcgtcaggcccgcgcacacca
agcatcattaaagttcccagctccctcaccctgatgtcgccgcgtcctgggaccccatca
cagccctcgccaccagcagctaaatatattgtcatggcaacaagtgcagggcctgcctcc
acccagcaggtaatcaccatcagctcctcccagtcagcctcaccagtcactagcactgtt
cccagtgccacttccaccttgcagcctttggtgaaactggagtccggcagtggccccggg
ctgacagcctcccgaccaatgcaaaagtacatcgttgtatctctcccctcgactgcc
DBGET
integrated database retrieval system
