Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022160G001
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Entry
GSTEN00022160G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00022160G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00022160G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Motif
Other DBs
NCBI-ProteinID:
CAG02917
UniProt:
Q4S8W5
LinkDB
All DBs
Position
7
AA seq
689 aa
AA seq
DB search
LSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDVRS
FSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHIIPWPHKISCACLECRNG
RQYDLLKFSLSRINTYRGIASRAYLSITSDDPMLKAFGLSRELRKLSQKEPEFKVRYRVS
DFCLSNRLSCVLNRLRRPPLVQPQYLSLEQLCQDYAVELLGMCRNQSEVTTILNSCGDES
QDSFEGQAFEEGIPSLSRLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKL
FVSVGIFLTMPLLCLIYWIAPKSKAGKILKIPVIKFLLHSASYLWFLIALLGESIMMELY
RDKFASRQQDILHSSFHMVWVVGFFWYECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASF
ALRVLIMLKGYFLCQDHSGTEECVYFTETVRENWHQEDPQLISEVLFAVTSMLSFTRLAY
ILPAHESLGTLQISIGKMIDDMMRWEQFQLSSSGRCWLKLIKASFFRFMFILMIIGTAFL
CGINNIYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVLAEFVGRILYGIFTL
VIVIVLLNMLIAMITNSFQKIEVRSPLGLAAAVRAASRQGHRCVLDFRMTPMLSGSLPDP
SCTSVTSGKVSPCLCPSTSSPHPKPSFIS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ctgtccatccgtctgggcaacgaagacgccatggacgcccttctgcaaggagtcaagttt
gacttccggcagattcacgaggctctgctggttgccgttgacaccaatcagcccagagtg
gtgaagcgcctcctggaccgcctggaccaggagaagggcaacaagatggacgtgcgctct
ttctctcaggccattttcgaccactccattgacaactcccagtttgcccctggtgtgacg
cctctgaccttagcctgccagaaagacttgtacgacattgtcaccatgctcacacagaaa
ggtcatatcatcccctggccgcacaagatatcctgtgcctgcctggagtgtcgcaacggc
aggcagtacgacctgctgaagttctccttgtctcgcatcaacacataccgaggcatcgcc
agtcgcgcttacctgtccatcacctctgacgaccccatgctcaaggctttcggtctcagc
agagagctccgaaagctctctcagaaggaaccggagtttaaggtgcgatatcgagtgtcg
gatttctgcctgtccaatcggttgtcttgtgtccttaaccgactgcggcggcctcctctc
gtgcagcctcagtacctgagcctggagcagctgtgtcaggactacgccgtggagctgctg
ggcatgtgtcgcaaccaaagcgaggtgaccaccatcctgaacagctgcggggacgaaagc
caggattcctttgaggggcaggccttcgaggagggaatacccagcctctcgcgcctgcgg
ctcgctgtcaactacaaccagaagcagtttgtggcacacccaatctgccagcaggtgctg
tcatccatctggtgcgggaacctggcagggtggagaggcagccgaacagcctggaagctg
tttgtgtccgtggggatcttcctgaccatgccactcctctgtcttatttactggatcgca
ccaaagtctaaggctggaaagatcctgaagattcctgtgattaaattccttctccactcg
gcatcctacctgtggtttctcatcgcgctgctcggagagtcgataatgatggagctgtat
cgggacaagtttgcctcccgccagcaggacattctccacagctccttccacatggtgtgg
gtggtcggatttttctggtatgaatgtaaggaggtgtggatcgagggtctgcggagttac
tttctggactggtggaactgcctggacgtgatggtgctcagcatgtacctggcttccttt
gcgttgcgagtgctaatcatgctcaaaggttacttcctctgccaggatcacagcggcaca
gaggagtgtgtttacttcactgagacagtgcgtgagaactggcatcaggaggacccacag
ctcatctcagaggtgctgtttgcagtcaccagcatgctgagcttcacacggctggcgtac
atcctgccagcccacgagtctctgggaactctgcagatctccatcgggaagatgatcgac
gatatgatgaggtgggagcagtttcaactcagctccagtggtagatgttggttaaagctg
atcaaagcttctttttttaggttcatgttcatcctgatgatcattggaacagccttcctg
tgtggcatcaataatatctatgttccctatgtcatttctccacatctgggcaggtttaat
gagaccttccacttcctattctggaccatgttcggagtggccaaccaggactatgtggac
atgcctcagtttgtgttggcggagtttgtggggaggatcctgtacgggatcttcaccctc
gtcatcgtcatcgtcctgctcaacatgctcatcgctatgatcaccaactcctttcagaaa
attgaggtaaggagccctcttggcctcgcagctgcagtcagggcagcgtccaggcagggt
caccgctgtgttcttgacttcaggatgacgccgatgttgagtggaagtttgcccgatcca
agttgtacctcagttacttcagggaaggtctcaccatgcctgtgcccttcaacatcatcc
cctcacccaaagccatctttcatatcttaa
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