Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022596G001
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Entry
GSTEN00022596G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K24737
WD repeat-containing protein 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tng04990
]
GSTEN00022596G001
Domain-containing proteins not elsewhere classified [BR:
tng04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
GSTEN00022596G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
DSE1_N
CFAP251_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
PAC11
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_VPS8
NBCH_WD40
Motif
Other DBs
NCBI-ProteinID:
CAG03259
UniProt:
Q4S7X3
LinkDB
All DBs
Position
9
AA seq
1094 aa
AA seq
DB search
LAVFGGKAVRLVRLYVDLQHRNKPHFEMRSPLMELQDWILDVRWLSGDSHSLLCVAVAHN
TSLLLDVTSGDVVVRRSCAEGCLLYSALLLVHESWADTVLIGGTVFNQLILWKPGGGDGR
STSVDKAPVDRRLLGHNGVIFSICYLQDEGWLASASDDRSVRVWDVGVLGGHGGKCGHSN
PSCLRVLYGHQARVFSVCLSRDKVFSAGEDGACLIWEVGGGKAVRKLKGHRAGGVRALAV
SEGAADGERWVATGGADGAVRLWAVGGREERKEGTEEELTGRLSDLGFSGRGVPKLVRRA
THEDAPASWSQSKFVVCTDQGTVYQYSDRRWEVVWQASPEFQSYCVMETVTAAEVCLCAV
GSLSGLIQVFPLSRPDGGSLLRGGSGKVHSLIWQKAVHSVYLLASAAEGHVYRWSVKVAL
DAKGFPSLHVDALPTFLLPPCAKRWLTAAVCLRSTPHGVLWVCGDRRGSLLLFEEGSPQA
QEAAGGANACEAALQPLSCLFGVHGKQGVTSVCEHRGLLYSTGRDGCVRVFRVRPGPGGD
KAGLQLEVLRFQRACKGMEWLERVLILETEIWEQEEEEEEVEREARFVIAGFQAVHFVVW
DPVRQERLLAVPCGGGHRSWSLWPPHRGVWPGYGVLVFIKQGAVLASHPPAEALSSGEMG
RSEGWSLREGVHGRGIGCVCRLGRITPVGRVGNSVEAREEPRDEGPWEVVVTGGDDTSLT
VLALLPSCGRVRVLSVITDHISSVRALTTVTRVEEAGEHPLLSALLVSAGGRAQVQCYRL
LVSAHGNRRVPTCQVVQVAGHRLDQQWERRRNRHKTVKMDPETRRVGADKVEMYMSAVVL
DGNSDCHLLALACSDGALRLFSVSEGKRQIDLLWENFHHQRCVLSVAACSLEDGTGSSVF
TRVHPSISISLRYTLLFSAATDGKIAVWDLTEASSVSAITKNAPVPSAPCLSVPAHQSGI
NSLAAWVDKQGSGCQVTVASGGDDGQLTVSVIKVQFPKEPTTGGSRESSQISGCPSPQQQ
PFQPSRLVFHLNSQHRVPTAHAAPLTSLKLLRPGLVVSTSADQRVCLWEVGSAGVRQIGS
LCSHVADAAGLAVW
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
ctcgcggtatttggaggcaaggctgtgaggctggtgaggctctatgtggatctccagcac
agaaataagccccactttgagatgcggagcccccttatggagctccaggactggatcctg
gatgtccgctggctctctggggacagtcactcactcctctgcgtggctgtggcccacaac
accagtctgctgctagatgtcacttcaggagatgttgtcgttcggcgctcctgtgcggag
ggatgtctgctctactccgccctcctcctagtgcatgaatcatgggcggacaccgtcctg
atcgggggaactgttttcaaccagctgattctctggaagccgggcggaggggacggtcgt
agcacgtctgtggacaaagctccagtggacaggcgcctgctcgggcacaacggagtcatc
ttcagcatctgttaccttcaggacgaaggatggctggcttcagcctcggatgaccgtagc
gtaagagtgtgggacgttggtgttttaggaggtcacgggggcaaatgtggacattccaac
ccgtcttgtttaagggtcctttatggacaccaggcaagggtgttctctgtgtgtctttcc
agggataaagtctttagtgctggggaggacggggcctgtttgatctgggaggtaggtgga
ggtaaagcggttcgtaaactgaagggacaccgggcgggcggggttcgggcacttgcggtg
agcgagggagctgcagatggggagagatgggtggctacagggggcgccgatggagcagtg
aggttgtgggcggtgggagggagggaggagagaaaggaggggactgaggaagagctgaca
ggcaggttaagcgacctgggattctctgggcgaggcgtgcctaagctagtccgtagagcc
acgcacgaggacgcacctgcaagttggagtcagagtaagtttgtcgtttgcactgatcaa
ggaacagtttatcagtacagcgaccggcggtgggaggtcgtctggcaggcgagccccgag
ttccagtcgtactgcgtgatggaaacagtgaccgcagcagaagtgtgtttgtgtgctgtg
ggaagcctcagtgggctcatacaggtctttcccctctctcgacctgacggtgggagtctg
cttcgaggcggatcaggaaaggtccatagtcttatttggcagaaggcagtgcacagcgtg
tatttgctggcatcagcagcagaaggacacgtttatcggtggtccgtgaaggtagcactg
gatgctaagggtttcccgtctctgcacgtagacgcccttcccactttcctccttcctcct
tgtgcgaagcgctggctgacggcggccgtgtgcctccgctccacgccacacggggtcctg
tgggtgtgtggggacaggagaggatccctgctcctgtttgaggaaggatcgccacaggcc
caggaggcagcgggtggggcgaatgcctgcgaggccgccctgcagcccctgagctgcctg
ttcggagtgcacggaaagcagggggtaacctcagtgtgcgaacacagggggctgctgtac
agcaccggcagggacggctgcgtcagggtgttccgggtgcgtccagggcccgggggggac
aaagccgggcttcagctggaggttctccgattccagcgagcctgcaaaggtatggaatgg
ctggagcgggtgttgattcttgaaacggaaatttgggagcaggaggaggaggaggaggaa
gtggaaagggaagccaggtttgtcatcgccggctttcaggctgtccactttgtggtctgg
gacccagtgaggcaggagaggctgctggcagtgccctgcggaggggggcatcgctcctgg
agtctgtggcccccccatagaggggtttggcctggctatggcgtgctggtcttcatcaaa
cagggagctgtcctggcctcacacccccccgcagaggcgctgagctccggggagatggga
aggtccgaggggtggagtctgagagaaggggtgcacgggaggggcatcgggtgcgtgtgc
aggctggggaggataacgccagtcggccgcgtggggaattccgttgaggcgagggaagag
cccagagatgagggaccctgggaggtcgtggtgacgggaggagacgacaccagcttgacc
gtcctggcgctcctccccagttgtggacgcgtcagggtcctctccgtgatcaccgaccac
atctccagcgtgcgggcgctgacaacggtgacgcgtgtggaggaagccggcgaacacccg
cttctgtccgctttactggtgtcggcgggcgggcgagctcaggttcagtgctatcgactg
ttggtcagcgcgcacggaaacagacgggttcccacctgccaggtggtccaggtggcaggg
caccggttggaccagcagtgggagagaaggcgcaatcgccataaaaccgtgaaaatggac
cccgaaacaaggcgagtgggagcggataaggtggaaatgtacatgtctgccgtggtgctg
gatgggaactcggactgccaccttctggcgctggcctgcagcgacggagctctcagattg
ttctcggtcagcgaagggaaacgccagattgatttgctgtgggagaacttccaccaccag
cgctgcgtgctcagtgttgctgcctgcagcctggaggatggaacaggcagcagcgtgttc
acgcgtgtccacccttccatctccatctccctcaggtacacgttgctgttcagcgctgca
acggatggcaaaattgccgtgtgggatttgactgaagcttcttctgtatccgccattacc
aagaacgctccagtcccatcagccccctgcctcagcgttcctgcccaccagagcggcatc
aattcattggctgcttgggtggacaaacaaggcagcggttgccaggtgactgttgctagc
ggaggcgatgatgggcagctgacggtctccgtaattaaggtgcagttcccaaaggagcca
acgactgggggcagcagagagtcatctcagatctccggctgccccagccctcaacagcag
cccttccaacccagcaggctcgtttttcatctgaattcccagcaccgcgtccccacagct
cacgctgcccccctgacctccctgaagctgcttcggcccggtctagtggtctccacctcc
gcagaccagagggtgtgtctctgggaggtcggcagcgccggcgtccgtcagatcgggtcg
ctgtgctcccacgtggccgatgctgcaggactggcagtgtgg
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