Tetraodon nigroviridis (spotted green pufferfish): GSTEN00022697G001
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Entry
GSTEN00022697G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00022697G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00022697G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00022697G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
GSTEN00022697G001
Coactivators
SAGA/TFTC/STAGA complex
GSTEN00022697G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
GSTEN00022697G001
STAGA complex
GSTEN00022697G001
TFTC complex
GSTEN00022697G001
SAGA complex
GSTEN00022697G001
SLIK complex
GSTEN00022697G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_VPS8
ANAPC4_WD40
Beta-prop_Aladin
DSE1_N
Beta-prop_TEP1_C
NBCH_WD40
PAC11
Beta-prop_SCAP
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_HPS5
Tricorn_2nd
WD_LRWD1
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
LisH_TPL
Beta-prop_WDR11_2nd
LisH_PAC1
Motif
Other DBs
NCBI-ProteinID:
CAG03344
UniProt:
Q4S7N8
LinkDB
All DBs
Position
18
AA seq
802 aa
AA seq
DB search
MSPSPSSSSSPGNNNNNNTATESTVDQQTLVAVLQFLKKSKLNASVDILRREAGLPEDSL
DVKGSDPGAQGAAGGADLEGVDAATLLNRVTVSSSAGAQLPTKDKAEDQPDVNVVLSAYS
QQGDPALYEVYYSSLKKFIESVLDCHRAELSQVFYPLFVHMYLELVYNNHENEAKAFFQK
FSGDQECYYEDDLRVLSSLTKKEHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQN
NQIWNIIQEHLYIDIFDGMPRSKGQIDAMSGSLAGEAKREANKTKVGYTRYYRHTHGPDL
TMMTFVMSFDQVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSMGSKSKKQDPN
APAQTRIPLPELKDSDKLDKIMYMKETTKRIRLGPDTLPSICFYSFLNAYQGLTGVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRKVKSAAGTAVRSDRTVPGNSLIFSEEIQMFSSLLH
EDLNLIDKESDDVLERIMDEKTASESKILHGHSGPVYGISFSPDRNYLLSSSEDGTVRLW
SLQTFTCLVGYKGHNYPVWDVSFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADV
TCTRFHPNSNYVATGSSDRTIRLWDVLTGNCVRIFTGHKGPIHTLDFSPSGKFLASGATD
SRVLLWDIGHGLMVGELKGHTDTIYTLKFSRDGEILASGVWPLAFHLNPFSRLVSNKRQD
WSNDLCLRVLLGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELLLGTYMSKS
TPVVHLHFTRRNLLLAAGAYNP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttcccccagctccagctcttcgcctgggaataataacaataataacaccgcg
acagaaagcacggtggaccagcagacgctggtggcggtcctgcaattcctcaaaaagagc
aaactgaacgcttctgtcgacattctgcgccgtgaagcgggattaccggaggattctctc
gacgtgaagggaagcgatcccggggcccagggtgctgcgggcggtgcagacctggaaggc
gtggacgcggccactcttctgaaccgggtcaccgtctcatcgtccgccggagctcagctg
ccgaccaaagataaagccgaagaccagcccgatgtcaacgtggtgctgtcggcttacagc
cagcagggagatccggcactctatgaagtctactacagcagcctgaagaagttcatagaa
tcggtcttagactgccacagagctgaactctcccaggtcttctacccactctttgtccac
atgtatctggagctggtctacaacaaccatgaaaatgaagcaaaggcattctttcaaaag
ttcagtggagatcaggagtgctactatgaagacgacctgcgggttttgtccagcttgacc
aaaaaggagcacatgagaggaaacgagaccctgctggacttccgtaccagcaagtttgtg
ctgcgcatttccagggactcctaccaactgctgaagaggcacctgcaggagcgacagaac
aaccagatctggaatatcatccaggagcacctgtacattgacatttttgacggcatgcca
cgaagcaagggccaaatcgatgccatgtctggtagcctggcgggagaagccaagcgagag
gccaacaagactaaggtgggatatacgcgctactacagacacacacacgggcctgatttg
acaatgatgacgtttgttatgtcgtttgatcaggtttattatggattgctaaaagaaccg
gagattgagctgcctctagacgatgaggatgaggaggcagagaatgaggaggggaaacct
aagaagaagaaacctaagaaggacagcatgggttctaagagcaagaagcaagatccgaat
gcaccagcacagacaaggatacctttaccagaactaaaggattcagataagctggacaaa
atcatgtacatgaaggagactaccaagaggatccgcctgggaccggacacccttccgtcc
atttgtttctattcattcctcaatgcgtatcagggcctgactggggtggatgtgacggat
gactcgagcttgatcgcgggaggcttcgccgattccacggtcagggtgtggagcgtcacg
ccgaaaaaactgcgcaaggtcaagtctgcggcaggtacggcagtcaggagtgaccggacc
gtaccgggaaatagtctgattttcagtgaggaaattcaaatgttctcctctcttctgcat
gaagacctgaacctaattgacaaggagtctgatgacgtgctggagaggatcatggatgag
aagacggccagtgagtcgaagatcctccacggacacagtggcccggtgtatggcatcagt
ttcagtccagacagaaattacttgttgtcgagctctgaagatggaacagtcaggctgtgg
agtcttcaaacctttacttgtctcgtgggttacaaaggccacaactatccggtctgggac
gtcagtttttctccgcatggatactactttgtctcagggggacatgacagagttgcccgc
ctgtgggcaacggaccactaccagcccctgcggatattttccggtcacctagctgacgtc
acctgcacccgcttccaccccaactccaattacgttgccacggggtcttctgatcgcacc
attcggctgtgggatgttctgactggcaactgcgtccgcattttcaccgggcacaagggg
ccgattcacacactggatttctctcccagtggaaagttcttggcttcgggggccactgat
agcagagtcctcctgtgggacattggccacggactcatggttggagagctgaaaggacac
accgataccatctacaccctcaagttcagcagagatggagagatccttgcctctggtgtg
tggcctttggcattccatttgaatccattttcccgtctcgtgtctaataagaggcaagat
tggagtaacgacttgtgtcttcgtgtgcttttaggttccatggacaacacagtccgcctc
tgggatgctacgaaagcatttgatgacttagagaccgatgatttcacagcagcaactgga
cacattcatttacaagacaactctcaggagctccttttaggcacatacatgtctaaatcg
acacctgtcgtgcacctgcacttcacacgcaggaacctgctgttagcggccggagcctac
aaccct
DBGET
integrated database retrieval system
