Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023032G001
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Entry
GSTEN00023032G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K22804
structural maintenance of chromosomes protein 6
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00023032G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
GSTEN00023032G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
CCDC39
FKBP15
ODAD1_CC
AAA_13
Laminin_II
Tropomyosin
AAA_29
SKA1
AAA_21
Motif
Other DBs
NCBI-ProteinID:
CAG03568
UniProt:
Q4S714
LinkDB
All DBs
Position
14
AA seq
1088 aa
AA seq
DB search
SDVGIVKSITLKNFMCHANLGPFAFGSNVNFVVGKNGSGKSAILTGLIVALGGNAQATNR
GSSLKGFVKEGESAADVSVTLNNVGRDAYKPGVYGQTIVVDQRITREGIRSYKLKNNSGR
IISTKKEDLLAILDNFNIQVNNPVTVLTQEMSKYFLHSKGVAEKYKFFMKATQLEQMKDD
FVHIKSTKSVTVDKVDQYSECLKDLRQDYLEKEDRYNSLASVNEMHTKLEELQKQMAWAL
VAEVQTELKPMKEKLESDRRAIDKFDEKVEEWKKKVEVAEGKQKQSQEQLDGISQQISEL
QSKCAVLKAELQKRNANLKSCEVTVHRHKANIRDLEKDRVQLSSKIHDLNLSISQATGAE
SQARVERIAQIEAELEHLTHHTSTLGQQIEQYQHASGRATEEQKKMKKEQEGLQRSIDTN
RRHLQSMESSRSNRLRRFGEHMPALLTAIEEAYKKGQFKHRPRGPLGYLISLKDQELALP
IEICLKNQLLAFTCDNYDDERVLKGLMAKVLHHGRRPAIITSRFFPKVHDTQRRGVRHPE
YPSVLQALEIEDPVVANCLIDQRAIECILLIKNRTEARRVMQGKTPPQNCTQAFSKEGDQ
IFTNRSYTADQTRVNFLSRDVEEGIRHLQREIENQNRQAAHVQQQIRRFDEDIRQNQELL
RRACTEQKSTKDKTTKLQLELTDLKNVEEPQSEDLRPLEEDLQEIVAKISSKRVEFDEAR
AQMAELKAAYDKAEQEYKQHKELINTAAEEADVKKEELSKTDQEVVRCKHHKKHYDEKRG
AHLCSIQTLQNSVAGKEKELQESIAKAKKFCSEQLEVRRTARSLDTEITRLKSKIETQRE
HQGDREEIVRQYHEALENYKNKTQQIKHLKNFIKCLDQVIYQRLHAYAELRRYARVQSGS
IAGVKFSVSFFYSHILPFLYLRYLSARCKYYFDSMLAQRGYTGNMTFDHKNETLSISVQP
GQGNKADLNDMRCLSGGERSFSTVCFVLSLWPITEAPFRCLDEFDVYMDMVNRRISIDMM
LKVADSQRNRQFIFLSPQSMRMLGRRSASPGSVWYWVSTTLLLATRLQPPWLLRSPLTFT
QAQARAEG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
agtgatgtggggattgtaaagagcattacactaaagaacttcatgtgccacgctaacctc
ggcccatttgcgtttggctccaatgtcaactttgttgttggcaagaatggaagtgggaag
agtgcaattctgactggtctcatagttgccttaggtggtaacgcacaagcaacaaacaga
ggctcatccttgaagggctttgtgaaagaaggcgaaagtgctgctgacgtgtcagtaacc
ttaaataatgttggaagggatgcgtacaaaccaggcgtttatggccaaaccatcgtggta
gaccagagaataacacgcgagggaataagatcatataaactgaaaaataattcaggtcgt
attatctcaaccaaaaaggaagaccttctggccatcttagacaactttaatatacaagtg
aacaatcctgttacagttctcactcaggagatgagtaagtacttccttcactccaaagga
gtggcagagaaatacaagttttttatgaaagcgacccagctggagcagatgaaagatgac
tttgtccacatcaaatcaaccaaatctgttacagttgacaaagttgatcagtacagtgaa
tgcttaaaagatttgaggcaggactacttggaaaaagaagaccgttacaacagcctggca
tcagttaatgagatgcacaccaaactggaggagttgcagaagcaaatggcttgggccttg
gtcgctgaggtgcagacggaattgaagccgatgaaggagaagctggaatcagacagacgt
gctatagataaatttgatgagaaagtggaagaatggaaaaaaaaggtggaagttgctgag
gggaagcaaaagcaaagccaagaacagctggatgggatcagccaacagatctcagagctc
cagtctaagtgtgctgtgctcaaggctgaactccagaaaagaaatgccaacctcaagtcc
tgtgaggttaccgtccacagacacaaggctaacataagagacctggagaaggaccgggtt
cagctgtcctccaagatccatgatttaaatctgagcatcagccaggccacaggagcagag
agccaggccagggtggagcgtattgcgcagattgaggccgagctggaacacctgacacac
cacacttccacactgggccagcagattgagcagtatcaacatgcctctggccgtgccacg
gaggagcaaaaaaaaatgaagaaagagcaggaagggctccagaggtccattgataccaac
aggagacatctgcagtccatggagagcagtcgctccaatcgcctgcgacgtttcggagag
catatgccggctcttctcactgccattgaggaggcttacaaaaagggccagttcaagcac
agaccacgtggacctctgggataccttattagcctgaaggaccaggagctggccctgccg
atagagatttgtctaaaaaaccagctgctggccttcacttgcgacaactacgatgatgag
cgggtgctgaagggtcttatggccaaagtccttcaccacggcaggagacctgccatcatc
acgagcagatttttcccaaaagtccacgatacacaaaggaggggagtgagacatcctgag
tacccctctgtccttcaagcacttgagattgaagatccagtcgttgccaactgcctcatc
gatcaaagggctattgagtgcattctactcatcaagaatcgtacagaggctcggagagtg
atgcaaggcaaaactccacctcagaactgcacccaggccttttcaaaagagggagatcag
atttttaccaatcgcagttacactgctgatcagacccgagtcaactttctttccagagat
gttgaggaggggatcaggcatctgcagagggagatagagaaccagaataggcaggcagct
catgttcagcagcaaattagaaggttcgatgaggacatcagacaaaaccaagagctactg
agaagagcttgcacagagcagaagtcaaccaaggacaagaccacaaagctacaactggaa
ctcacagacctaaaaaatgtggaagaacctcagtctgaggacctgagacctctggaggaa
gatcttcaggagattgttgccaagatctcatcgaagcgtgttgagttcgatgaggcgcga
gctcagatggctgagctaaaggccgcctatgacaaagcagagcaggagtacaagcagcac
aaagagctgataaacacagcagctgaggaggcggatgtgaaaaaggaagagttgagcaag
actgatcaggaggtggtgagatgcaaacatcataagaaacattacgatgagaaacgcggt
gcccatctctgcagcatacagaccctccagaacagcgttgctggcaaggagaaggagctt
caggaatctatagccaaggccaaaaaattctgttcagaacagctggaggttcgacggaca
gccagaagcctggacacagagatcactcgtctcaagagcaagattgaaacccagagagaa
catcagggcgaccgcgaggagattgtaaggcagtatcacgaagctctagagaactacaag
aacaagacacagcagatcaagcacctcaaaaatttcatcaaatgtctagatcaggtcatt
tatcagaggctccatgcttacgctgaactccggaggtatgctcgagtgcagagtggaagc
atcgctggggtaaagttctctgtttcatttttctattcccatattttaccttttctgtat
ctcagatacctctcagctcgctgtaagtactactttgatagcatgctggcccagagaggc
tacacaggaaacatgacctttgaccacaagaatgaaaccctctctatctcagtgcagccg
ggtcaggggaataaggctgacttgaatgacatgcgctgtctgtctggaggcgagcgctcc
ttctccaccgtttgctttgttctttctctgtggcccatcaccgaggcgcccttccgctgt
cttgatgaatttgatgtttacatggacatggtgaacagaaggatatccatagacatgatg
ctgaaggtggcggacagtcagcgaaacagacagttcatttttcttagcccacaaagcatg
agaatgttgggaaggcgctccgcgtcacctggaagtgtctggtactgggtctctacaact
ttgctcttggctactcgactccaaccaccgtggctgctacgttcacccctgactttcacc
caggcccaagcacgagctgagggctga
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integrated database retrieval system
