Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023216G001
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Entry
GSTEN00023216G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K07920
Ras-related protein Rab-33B
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
GSTEN00023216G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00023216G001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00023216G001
04031 GTP-binding proteins [BR:
tng04031
]
GSTEN00023216G001
Membrane trafficking [BR:
tng04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
GSTEN00023216G001
Others
Specific organelles associated proteins
Auto phagosome
GSTEN00023216G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
GSTEN00023216G001
GTP-binding proteins [BR:
tng04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
GSTEN00023216G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
SRPRB
GTP_EFTU
G-alpha
PduV-EutP
AAA_16
Septin
RsgA_GTPase
NACHT
AAA_22
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAG03706
UniProt:
Q4S6M6
LinkDB
All DBs
Position
undetermined
AA seq
221 aa
AA seq
DB search
LPDQISNFMESSLEFSGSLGSSFSSTRSRYRTFKVVVIGDSGVGKTCLTHRLCAGEFPRR
VEATIGVDFRERLLNVDGENIKLQLWDTAGQERFRKSMVQHYYRNVHAVLFVYDVTCPAS
FGSLTSWVEECRQNSLGHEVPRYVAPGAQNVGRRRFTAVVLKTRPSESSQVPRGQQERPP
PPRRRRLPGEPGASPELRQSPQHDVFPDVCQEPAKKSVGTG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ctgccggatcagatcagcaacttcatggaatcttctctggagttttccggctctttgggg
agcagcttctcctcgacgcggagccgctaccggacattcaaggtcgtggtgatcggggac
tccggggtggggaagacctgcctcacgcaccgactgtgcgccggagagtttccacggagg
gtggaggccaccatcggcgtggacttccgcgagagactgttgaatgtggatggagagaac
attaagctgcagctgtgggacacagccggccaggagcgcttccggaagtccatggtgcag
cactactaccgcaacgtgcacgcggtgctcttcgtctacgacgtgacgtgcccggccagc
ttcggcagcctgacctcctgggtggaggagtgcaggcagaactcgctgggccacgaggtg
cccaggtatgtggccccaggagctcagaacgttgggaggagacgtttcaccgccgtggtt
ttaaaaacgcgtccttctgaatcctctcaggttcctcgtgggcaacaagagcgacctccg
ccaccccggcggcgccggctgccaggtgaaccaggagcgagccctgagcttcgccagagc
ccacaacatgatgtttttccagacgtctgccaagagcccgccaagaagagcgtcgggacc
ggatga
DBGET
integrated database retrieval system
