Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023272G001
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Entry
GSTEN00023272G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16499
protocadherin delta 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00023272G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Protocadherins
GSTEN00023272G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
MPS-4
Cadherin_C_2
Motif
Other DBs
NCBI-ProteinID:
CAG03747
UniProt:
Q4S6I5
LinkDB
All DBs
Position
undetermined
AA seq
1259 aa
AA seq
DB search
MWKVLAVFATAAAMAPGVTGKTLKYQTFEEQKVGTVIARLKDDVADVLAKPRSSVSLRFK
AVQRGSSSFLSVREQDGEISVRTKIDREKLCEKNLNCSIQFDVLTLPTEHLQLFHVDVEV
LDINDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYTYALEPNNFFKIDIQ
SRTDGAKYAELVVLRELDREMRATYELQYTASDRGVPPRTGSTLLKISIVDSNDNSPVFE
KSSYVINLPENSPVGTLLIDLNATDADEGTNAKIVYSFSSHVSPKIMETFKINPDTGHLT
LIRRVDYETINSFDIDVQAQDMGPNSMPAHCKILVTVVDVNDNKPDISINPMSSQGNGDA
AYISEASPLDNFVALVRVEDLDSGLNGEVDCKLHSQGYFKLHKSNENNYMILTNMSLDRE
KKSEFSLTVVAEDRGTPSLSTVKHFTVHITDENDNPPRFEKGRYEVFKSENNAPGAYLTS
VMATDPDLETNGQVSYSILENSVHGNSISTYVTIDPSNGAIYALRTFDREDVSCITFVVQ
AKDAGKPPMSSNVTVILNILDENDNPPVIVVPQLWNFTADVPASKFTEAGQLVTMVRATD
RDTGVNAELICSIVSGNEESFFIIDPRTCEIHANASLENYPHEHAELTVMVRDQGRESLS
AKAVLKITLYENMENHVQVMDQGESTVDAPLIIIISLVAICAVLLVIMVVFAAHSSRERK
DARNSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHHSPTATPPLDRAQ
MGSRPNHNSRQSLNSLVTISSNHIPESFALELAHATPPVEVVSQLLSMLHQGQYQPRPSF
RGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLGEGFSDLIHLE
MHHRLHPAMRLCTDECRILGHSDQCWMPPISSPASSADYRNNMYIPGEESSQQPQTDDDQ
SSVDSERRKSFSTFGKECGSEEAEVGGVATGGGSDPCVTGGGAGSLLTEMNSVFQRLLPP
NMDSYAECNETSPTSSTAERINGRGGNVVSTHSNSAVPQDNRRVMLPGGKSPAYPPGVAA
WAASTHYLNPGSGSVGTNHVASSPTSTTSTPANGQSSHLKWLPAMEEIPENYEEDDFEGV
FHQGHPGGKRSEVSHEAGMDSSELVHEINKLLQDVTYFQYRFFAVFDHLHWSPRFLMLAK
LDCQELICSTESEESRGKVLQVPSVKELSMVSRHVLHDIAPLPMGITAMCIVGRSKHPV
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagttctggctgtttttgcgacggcagcggcgatggctccgggcgtcacaggc
aagacactgaaatatcaaacttttgaggagcagaaggtcggtacggtcatcgctcgtttg
aaagacgatgtcgctgatgttctggccaagcctcgcagctcggtgtcgctccgcttcaaa
gccgtgcagagagggagctcgtccttcctctcggtgcgcgagcaggacggcgaaatcagc
gtcaggaccaaaatcgaccgcgaaaaactctgcgaaaagaatctcaactgctctattcag
tttgacgtgctcacactgccaactgagcacctgcagctcttccacgtcgacgtggaagtg
ctggacatcaacgataacgctcctcagtttgcccgcgccgtcatccccattgagatctcc
gagagcgcggctgtgggagcgcgcattcccttggacagcgccacagaccccgatgtcggt
gagaactcgctgtacacgtatgcattagagccgaacaactttttcaagatcgacatccag
tccaggacggacggggctaaatatgcggagctggtggtgctcagggagttggaccgggag
atgcgcgccacttatgaacttcaatacaccgcttctgacaggggcgttccccccagaacg
ggttcgacgcttttaaaaatcagtattgtcgactccaatgacaacagtccagtttttgaa
aagtcttcatatgtgattaacctcccagaaaattcacctgtgggcactttgctcattgac
ctaaacgcaaccgatgcagatgaaggcaccaacgccaaaatcgtttactcattcagtagt
catgtgtcgcctaaaatcatggagaccttcaaaattaatcccgacactggtcacctgacc
ctcatcaggcgcgtggattacgagactatcaattcgtttgacattgatgtccaggcacag
gacatgggcccaaactcaatgccagcccactgcaagatcctagtgacagtggtggacgtg
aatgacaacaagccagacatcagcataaatcccatgtcctcccagggcaacggggatgca
gcttacatttcagaggcctctcctttggacaattttgtagctttggtaagggtggaggac
ttggactcagggctgaatggagaagttgactgcaagcttcacagtcagggatatttcaaa
ctgcataagagcaacgaaaacaactatatgatcctgactaatatgtccttggaccgagag
aagaagtcagagttcagtctgactgtggtggcagaagaccgcggtactcccagtctttct
acggtcaaacatttcactgtgcacatcactgacgaaaatgacaatccaccacgttttgag
aagggtcgttatgaggtctttaaatcggaaaacaatgcccctggagcctatttgacctct
gtcatggccaccgacccagatctggaaacaaatgggcaggtgagctattctatccttgag
aactcagttcacgggaactccatctccacctatgttaccattgacccatctaacggcgcc
atctatgcactgcgaacctttgatcgtgaggacgtcagttgtatcacctttgttgtgcaa
gccaaagatgctgggaaaccaccaatgagcagcaacgttacagtcattctgaacattcta
gatgagaacgataaccctccagtcattgtggtcccccaactgtggaacttcactgctgat
gtgcccgcatcaaagtttacagaggcagggcaattagttaccatggtgagggcaactgat
cgtgacacaggggtcaatgctgagctaatctgctcaatagttagcggcaacgaagagagt
ttttttataattgatccaagaacctgtgagatccatgccaatgccagcctggagaactac
cctcatgagcatgcagagctgacagtcatggtccgtgatcaagggagggaaagcctcagt
gctaaagcggtgctaaaaattaccctctatgagaatatggagaaccatgtccaggtgatg
gaccaaggggaatcaactgtcgatgctccactgatcataattatttccctggtggctatt
tgtgccgtgctcctggtcatcatggtggtctttgctgctcactctagccgggagagaaag
gacgcaagaaactcctacaactgccgggtcgccgagtcgacccatcagcaccatcctaag
aaaccctcccggcaaatccacaagggcgacattacgctggtacctacagtgaacggtaca
ctgccaatccgagcacaccaccactcgcccacagccacaccgcccttggacagagcccag
atggggagcaggccgaatcataacagccgccagtcactgaacagcctagtaaccatctca
tccaatcacattccggagagtttcgccttggaactggcacatgcgacgccaccggtggag
gtagtctcacagcttctgtccatgctccatcagggccagtaccagcccagacccagtttc
cgtggcaacaaatactcccgcagctacaggtatgcattgcaagacatggacaagttcagc
ctaaaggacagtggccgtggggacagcgaggcgggggacagtgactgtgacatggggcgg
gaatccccggtggacaggttactgctgggggagggtttttctgacctgatccacctcgaa
atgcaccacaggctccacccagctatgagactgtgcacagatgaatgtcgaatcctagga
cactctgaccagtgctggatgccccccatctcctcgcctgcctcctcagccgactaccgc
aacaacatgtacatcccgggggaagagtcatcccagcagccccagaccgacgatgaccag
tcctccgttgactcggaacgccgcaagagcttctccacttttggaaaggagtgtgggagc
gaagaagctgaggttgggggagtcgccactgggggaggcagtgacccctgtgttactgga
ggaggggctggctccctccttaccgagatgaactcagtgttccagcggctgctcccccct
aacatggactcatatgcggagtgcaatgaaacaagtccaacctcttcaactgcggagaga
ataaatgggcgtggtggcaacgttgtcagtacccacagcaacagtgccgttcctcaggac
aaccggagggtgatgctgcccggtgggaagagtcctgcttatccacctggtgtggctgca
tgggcggccagtacccactacctaaatcccggaagtgggtctgtgggaactaatcatgtg
gcctcatctcccacgtccaccacgtccactccagccaacggacagtcatcacacctcaaa
tggctgccagctatggaagaaatcccagaaaattatgaggaggatgactttgaaggtgtc
tttcatcagggtcatccaggtggcaagcgctccgaggtcagtcacgaggccggcatggac
agtagcgagctggtccacgagatcaacaaacttctgcaggacgtgacctacttccagtac
agattttttgcagtttttgatcatctgcactggtcgcctcgcttcctgatgctggcaaag
ctggactgccaagagctcatctgctctacggagagtgaggagagcagaggcaaagtgttg
caggtaccaagtgtgaaggagctcagcatggtctctagacatgtattacatgacattgct
cccttgccaatgggcattacagcgatgtgcatcgtgggaaggagtaaacacccagtgtga
DBGET
integrated database retrieval system
