Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023558G001
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Entry
GSTEN00023558G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06484
integrin alpha 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03266
Virion - Herpesvirus
tng04145
Phagosome
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04517
IgSF CAM signaling
tng04518
Integrin signaling
tng04810
Regulation of actin cytoskeleton
tng04820
Cytoskeleton in muscle cells
tng05100
Bacterial invasion of epithelial cells
tng05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
GSTEN00023558G001
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00023558G001
04517 IgSF CAM signaling
GSTEN00023558G001
04518 Integrin signaling
GSTEN00023558G001
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
GSTEN00023558G001
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00023558G001
09142 Cell motility
04820 Cytoskeleton in muscle cells
GSTEN00023558G001
04810 Regulation of actin cytoskeleton
GSTEN00023558G001
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
GSTEN00023558G001
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
GSTEN00023558G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tng04147
]
GSTEN00023558G001
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00023558G001
04090 CD molecules [BR:
tng04090
]
GSTEN00023558G001
Exosome [BR:
tng04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GSTEN00023558G001
Cell adhesion molecules [BR:
tng04515
]
Integrins
Integrin alpha subunits
GSTEN00023558G001
CD molecules [BR:
tng04090
]
Proteins
GSTEN00023558G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-ProteinID:
CAG03971
UniProt:
Q4S5W1
LinkDB
All DBs
Position
9
AA seq
1200 aa
AA seq
DB search
LAVCKAFNLDVESPTVYSGPAGSYFGYAVDFYLVNPSSGKGIRDGVFKEPVVPAVVSASL
GMPPGRHVSAGMELAIAPVTRFHTTVGLPVGERTPDVGIVEGCEPAAVKLRRKVLVQLFR
GRGRGGGGRDCGKTVDPTKCDIFMLTQSAPRGCTWSDFSLCVYPHKSAEHDSEPASAVIG
APKANTSQVNVTEGGSVFYCPWSLSQTDCHAIEFDTEGTKWCHRLSFKDESESMDALQTS
ALSCWSPETGPRADLPGDRTALVNDTKVQVDVKSHQWFGATVRTHKDTILACAPLYSWRT
EKDIPYSDATGTCYLSAENFTKFVEYAPCRTEISDAVGQGYCQGGFSADFTTDGKVVLGG
PGSYFWQGQVISAAKEDIIRTYYPGFFMQSVDTQIQTKQVQAAYDDSYQGYSVAVGDFNG
DHVEDFVAGVPKGLKLYGLVSVLNGTDLKTLMNYTGEQMGSYFGYAVATADINGDGMTDL
FVGAPMFMVRGSDSRLEEMGRVYVYLQRGPLNLELQSQRLTGTQVFGRYGSNIAPLGDLD
LDGFNDVAVSCPFGGEEQQGLVYIYNGRPEGLSEKPSQVIRGQWAAGSIPASFGFALRGA
KDLDMNGYPDLLVGAFGVDKAVLYRSRPIVNTSASLKVYPNMINPEEKNCVVTSGNTSIP
VSCVNLSFCISADGKHLPDTLDFQVEVQLDSQKHKQKGAVKRALFLDSQQPLLQRRVTVR
RGKRVCSDTKIYLRDEKDFRDKLSSIYVALNFSLDPEAAAASHSLRPILNYQTANVIEQK
AQILLDCGEDNICVPDLKLTVQGNRKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVALP
PEADYSGIVRDNESLSQLTCSYNTDNQTRYLSCDLGNPMKSGTSVWAGLRFTVPWLKDTQ
ETVQFELQIRSKNENNSHSEAVSYILEVEAQAAVILQGVSLPDKVFLPASWKSTKNYRVE
QDVGPGVDTSTSFQGQSLLYPLDFSTKGPINCTSDRTLNPLHLQLQPTPTQTPVLALKTD
EHHVSKRDVHKSQLAPPTNLSCSSSECWTLRCNVGLLGRGTTAILTVRSRVWTETFAERS
HRQHVLECVARYSVKKMPYLIPPRHYPSGHEKVCSGSGSPLFPSRSALQLSHSVTSGGDA
VGVEQAKRGKRRPAVDHHPGHPGRFAAPGSAHLRPVQVWILQAIRPLRRGHGESTNQARL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
ctggctgtttgcaaggcgtttaacctggacgtggagagcccgaccgtgtacagcggaccc
gccgggagctatttcggatacgccgttgacttttatttggtgaatccctccagtggaaaa
ggcatcagagacggcgtgtttaaagaacccgtggtccctgccgtcgtgtctgcctctttg
ggaatgcccccaggacgtcatgtctccgctggaatggagttggccatcgccccagtcacc
aggttccacacaacagtgggtctacccgtaggtgagaggacccctgacgtgggcattgtg
gaggggtgtgaaccagcagccgttaaactccgcaggaaggttttagtgcagttgttccga
ggacgggggaggggcggaggtggtcgggactgtgggaaaacggtcgacccgacaaaatgc
gatatttttatgttgactcaatctgcccctcgggggtgcacgtggagtgatttcagcctg
tgtgtctaccctcacaagtcggcggaacacgactccgagcccgcgagtgcggtgatcggg
gctcccaaggccaacacgtcgcaggtgaacgtcacagagggaggatccgtcttctactgt
ccgtggagcctcagtcagaccgactgtcacgccatcgagtttgatactgaaggaacaaag
tggtgtcaccgtctctcgttcaaagacgagagtgagtctatggatgcactccagacctcc
gcactctcgtgctggtcccctgagactggcccaagagctgacctcccaggggaccgcacc
gccttagtaaatgacacgaaagttcaggttgacgtcaagtcccaccagtggttcggggcg
actgtgcgtacgcacaaggacaccattctggcctgtgcgcctctctattcctggcgcacc
gagaaggacatcccttactccgacgcgacaggaacctgctacctttcagctgaaaatttc
accaaatttgtagaatacgctccctgccgcacagagatcagtgatgcagtcggccaaggt
tactgtcagggaggcttcagcgccgacttcacaacagatggcaaagtggtgctgggagga
ccaggcagctacttctggcaaggtcaggtcatctctgcagccaaggaggacatcatcaga
acctactatcccggctttttcatgcagtctgtggatacccagatccagaccaaacaagtc
caggctgcttacgatgacagttaccagggctattctgttgctgtcggggatttcaacggc
gatcacgtggaagattttgtggccggtgttccgaaaggactcaagctttatggcttggtg
tcagttctaaacggcacagacctgaagaccttgatgaactacaccggagagcagatgggc
tcttattttggttacgccgtagcgacagcggacatcaacggcgacgggatgaccgacctg
tttgtgggcgctcccatgttcatggtccgaggctccgatagccgtctggaggagatggga
cgcgtctacgtttacctgcagcgcggcccactgaacctggagctgcagtcgcagcgtttg
acaggaacccaggtgtttgggagatatggcagcaacatcgcaccactgggagacctggac
ctggatggttttaatgatgtggcggtcagctgtccatttggaggggaggagcagcagggg
ctggtgtacatctacaatgggcgcccagaggggctcagcgaaaagccgtctcaggtgatc
aggggccagtgggctgccgggagtatccctgccagcttcggatttgccctcagaggtgca
aaggacctggacatgaacgggtaccccgacctcctggttggggcctttggtgtggataaa
gcagttctctacagatcccgtccaatagtcaacaccagcgcgtctctcaaagtttacccc
aatatgatcaaccctgaggagaagaactgcgtggtcaccagtggaaacaccagcattcct
gtttcctgtgtcaacttgagcttctgcatatctgctgatgggaagcatctaccagacacc
ctagatttccaggtggaagtacagctcgacagtcagaagcacaagcagaagggcgcggtg
aaaagggctttgttcctggattcccagcagcccttgcttcagaggagggtgacggtgcgc
cgtggcaagcgtgtgtgcagcgacaccaagatctacctccgagatgagaaagacttcagg
gacaaactgtcttccatctacgtagccttaaacttcagcctggaccctgaagctgcggct
gcctcccacagcctgcgacccatcctcaactatcagacggccaacgtcatcgagcagaag
gcccagattcttctggattgcggagaggacaacatctgtgttcctgacctgaagctgaca
gttcaggggaacaggaaggaagtctacctgggtgacgacaactctctaacgctgactttc
aacgccagaaacgagggtgagggaggggcgtacgaggcggagctctacgtggcgctcccc
cccgaagccgactacagcggaattgtgcgggataatgagagcctgagccagctgacctgc
agctacaacaccgacaaccagacccgctacctcagctgcgatttgggcaaccccatgaag
tccgggaccagcgtgtgggcgggtctgcgcttcaccgtcccctggttaaaggacacgcag
gaaacggtgcagtttgagctgcagatccgcagtaaaaacgagaataattcccacagcgag
gccgtgtcctacatcctggaggtggaggctcaggctgcggtcatcctccagggtgtgtcc
ctacccgataaggtcttcctgccggccagctggaagtccactaagaactacagggtggag
caggacgttgggcctggagtggacacgtctacgagcttccagggtcagagcctcctctac
cccctggacttctccacgaagggacccatcaactgcacgtcagacaggaccctgaacccc
ctccacctccaactccagcccacgcccactcagacgcccgtcctggcgctgaagacagac
gagcatcacgtctcgaagagggacgtccacaagagtcagctggctcctccgaccaacctg
tcctgctccagttcggagtgctggaccctccggtgcaacgtgggcctgctggggaggggg
accactgccatcctcaccgtgcgctcccgcgtctggaccgagacctttgctgagaggtca
cacagacagcatgtgctggagtgtgtggccagatacagcgtcaagaagatgccttacctt
atcccacccaggcattatcccagcggacacgaaaaggtgtgttcaggctctggttctcct
ctgtttccttcacgatctgcgttgcaactctcacactccgtgacctcaggtggtgacgcc
gttggtgtggaacaagcaaaacgtggaaaacgccgtcccgctgtggatcatcatcctggc
catcctggccggtttgctgctcctggctctgctcatctacgtcctgtacaggtgtggatt
cttcaagcgatccgtcccctacgacgtggccatggagaaagcacaaatcaagcccgtctc
tga
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integrated database retrieval system
