Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023702G001
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Entry
GSTEN00023702G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
GSTEN00023702G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00023702G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Major cadherins
GSTEN00023702G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
DUF2304
DUF2254
Motif
Other DBs
NCBI-ProteinID:
CAG04079
UniProt:
Q4S5K3
LinkDB
All DBs
Position
9
AA seq
759 aa
AA seq
DB search
MTFRAAERLSCDGKKDQSPDLRPRGPKGSQNRVFPHLCLPLLGVCAAVPCSQSPSAQTRT
RTSRSDTASPGWEPINRPTRFLILTLCSERMFVTKPLDREHRSSYHLRAHAVDMNGNQVE
NPIDLYIFVIDMNDNRPEFKNQIYNGSVDEGSKPAPCVQAAEEADGTYVMHVSAFDADDN
TTANGMVRYRILSQMPHSPIPNMFTINSETGDIVTVASGLDREFSGEVPENKVDVVVANL
TVIDADQPHSPNWNANYRIISGDPTGHFTIRTDPVTNDGMVTVVKPVDFERNHAFMLTVV
VSNQAPLASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSLTTFSASD
PDRLQMQQTIRYSKLNDPADWLSINRSNGQIITTAMLDRESIYVKNNIYEATFLATDNGS
PVASGTGTLQIYLIDINDNSPALIPKESQICERTSRNVNSVNITAADEDTDPNAGPFVFE
LPNFPTSIRRNWTISRISALPSPGESSPRTGDYARLGLRYQVYLEPGVYEVPVIVSDSGN
PPLSNRSVIKVKVCPCDEHGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVMWIK
RREKERQNKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVR
RVDERPIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTA
GSVSSLNSSSTGDQDYDYLNDWGPRFKKLADMYGGGVED
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgacgttccgggcggcggagcggttgagctgtgacggtaaaaaggatcagtccccagat
ctcaggccccgcggcccgaaaggctcccagaatcgtgtcttcccccacctctgcctccca
ctgctgggagtctgtgcagccgtgccctgcagtcaaagcccatccgctcagaccaggacc
aggacatctcgatccgatacagcatcaccgggatgggagccgatcaaccgcccaacgagg
tttttaatattgaccctgtgctcggaaagaatgtttgtcaccaaaccacttgaccgggag
catcgttcttcttaccacttacgagcccacgccgtggacatgaacgggaaccaggtggaa
aaccccatcgatctctacatctttgtcatcgacatgaacgacaacagacccgagtttaaa
aaccagatttacaacggctccgtggacgaaggctccaaaccagcgccatgtgttcaggct
gccgaggaggcagacggtacatacgtaatgcacgtgtcagccttcgacgcggatgacaac
accaccgctaacggaatggtgcgctaccggatcctgtcccagatgccgcacagccccatc
cccaacatgttcaccatcaacagcgagacaggcgacattgtgacggtggcgtccggtctt
gatcgtgagttttctggcgaggtcccggaaaacaaggtggatgtggtggtggctaatctg
acagtgatagatgccgaccagccgcattccccgaactggaacgccaactacaggatcatc
agcggagacccgaccggccacttcaccatccgcactgaccccgtcactaatgatggcatg
gtcaccgtggtaaagccagtggactttgagaggaaccacgccttcatgctgacggtggtg
gtgtccaaccaggctccattagccagcggcatccagtcatcgctgcagtccacggccggc
gtcaccatctccgtccaagacgtcaacgagcctccctacttccccaccaaccccaagcac
atccgtttcgaggagggcgtgcccgccggcacgagcctgaccaccttctcggcctcagat
cccgaccgactgcagatgcagcaaacaatcaggtattccaagctgaacgaccctgcagac
tggttgtccatcaacagaagcaacgggcagataatcactacggcgatgcttgaccgggag
tccatctatgtcaaaaacaacatatatgaagccaccttcctcgcaacagacaacggctca
ccggtagccagcggcacgggcacgctgcagatctatctgatagatattaatgacaactcc
ccggccctcatacccaaggagtcccagatctgtgagcggacgagcagaaacgtcaacagc
gtcaacatcaccgctgccgatgaggacacggaccccaacgctgggccctttgtctttgag
ctgcctaactttcccaccagcatccggcgcaactggacgatctcccggatcagtgcactg
ccctcccctggggaatcctctccccgcacaggagactacgcccgcctgggcttgcggtac
caggtgtatctggagccgggggtgtacgaggttcccgtaatcgtgtcggactccgggaac
cctccgttgtccaaccggtcggtgatcaaagtgaaggtgtgtccctgcgacgaacacgga
gactgcaccaccctcggcgccgtggcggcggccggcctggggacgggcgccatcatctcg
atcctcatctgcatcatcatcctgctgagtatggtgctactttttgtcatgtggatcaag
cggagagagaaagagaggcagaacaagcagctgcttattgaccctgaagatgatgtcagg
gacaacattctcaaatacgatgaagagggaggaggagaagaggatcaggactacgacctg
agccagctgcagcagcccgactccttggagcacatcatcagcaaaccgcctggtgtccgc
agggtggacgagcgtcccatcatcccggagtcccagtaccccatcagaccagtggtgcct
catccgggagacatcggggattttatccatgaggggctgcgggcggctgacaacgacccc
acagctccgccctacgactccctgctggtgtttgactacgagggcagcggctccaccgcc
ggctcggtcagctccctcaattcctccagcacgggggaccaggactacgactacctcaac
gactggggcccccgcttcaagaagctggccgacatgtacgggggaggagtggaggattaa
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