Tetraodon nigroviridis (spotted green pufferfish): GSTEN00023883G001
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Entry
GSTEN00023883G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20020
brother of CDO
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
GSTEN00023883G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00023883G001
Cell adhesion molecules [BR:
tng04515
]
Immunoglobulin superfamily
Other
GSTEN00023883G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Ig_5
Ig_4
Motif
Other DBs
NCBI-ProteinID:
CAG04226
UniProt:
Q4S556
LinkDB
All DBs
Position
6
AA seq
1089 aa
AA seq
DB search
MTIRVGLRSRRGELLRASGEGSVWKMPGKRDWTPWMKKNRAPVLCTLGAVLLCCLQSGAS
VPDEVPVFTEEPASVVQKLGGSVSLRCSARPALANISWRLNGQELLDGDFGAVLGPNSLY
IPSLSNLTLGRYQCVASTGVGALASVLANVTAAKLRDFEPDDHQEIEVDEGNTAVIECHL
PESQPKAQVRYSVKQEWLETSKGNYLIMPSGNLQIANATQEDEGPYKCAAYNPVTQEVKT
SISADRLRIRRSTSEAARIIYPPASRSIMATKGQRLVLECVASGIPTPQVTWAKDGQDLR
YVNNTRFLLSNLLIDAVGESDSGTYACQADNGILASASAMVLYNVQVSEPPQVTVELQQV
YGGTVRFTCQARGKPAPSVTWLHNARPLSPSPRHRLTSRMLRVSNVGLQDEGLYQCMAEN
GVGSSQASARLIIASAVVPPRGKPPSIFLSPDKVLREQPPVRPGPGGAMLPLDCSELPGQ
VLPAEAPIILSQPRTGKADYYELTWRPRHERGVPVLEYMIKYRKVGDPLAEWTSSSISGS
LHKLTLAKLQPDSLYEVEMAAKNCAGLGQPAMMTFRTGKGTSEHLGDVSGKVLRVGAGRR
GKIDPPKTPAVPSPSLSRFFLPCVSCPVPFHTAPPPPAAPEAPDKPTVSAATETSAYVTW
IPRGNRGFPIQSFRVEYKKVKKAGEDWVTAVENIPPSRLSVEITGLEKGTSYKFRVVAVN
VIGSSPPSAPSKAYAVVVGRTPERPVDGPYITYNEAINETSIILKWTYTPVNNTPIYGFY
IYYRPTDSDNDSDYKKDVVEGDKYWHSITNLQPETAYDIKMQSFNEKGESEFGNVVILET
KGGAVVSLAPGGVEDRTGCIDCIPPLRLASPPQSARPVGDPRLQSWNPQGRRASARRPPL
LHSRHCPRGLHLHHCGLHPLLSLEDLGQAEANIRHVLSRRALPRAILPVHHGPSPGTGPG
WPLPAGWSHDRAARGLPCEWRVRHEWQTSPPARTAAGKEAKRWNRPVWWEWKASAVVSPQ
EEADCDMECDTLLPQTVPNGHLPVCHYPTRVGVLSSPLSGRRRGLHHVLLDGHNATIPRY
DSGSEHPPK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccgtgtggggctccggagccgacggggagagctgcttcgagcatccggagag
gggagtgtatggaaaatgcctggaaagcgcgactggactccgtggatgaaaaagaatagg
gctccagtcttgtgcactctgggtgcagtactgctatgctgcctgcagagcggtgcctct
gtccctgacgaggtgccggtgttcaccgaggagcctgcgtcggtggtgcagaagctcggt
ggtagcgtgtctctgcgctgcagtgcccggcccgccttggccaacatcagctggcgcctc
aacggccaggaactgctggatggagattttggagccgtgctggggcccaacagcctctac
atcccgtctttgtccaacctgaccctgggcaggtaccagtgtgtagccagcactggtgtg
ggcgccttggccagtgtactggctaatgtgacggctgccaagctgcgggatttcgagccg
gacgaccatcaggagatcgaggtggacgagggcaacacggccgtcatcgagtgccacctc
cccgagagccagcccaaggctcaggtccgctacagcgtcaagcaggagtggctggaaaca
tccaaaggcaactacctcatcatgccatcagggaacctgcagatcgctaacgccacccag
gaggacgagggcccgtacaagtgcgccgcctacaaccccgtcactcaggaggtcaagaca
tccatctctgcggaccgcctgcgcatacgccgctccacctccgaggccgcacgcatcatt
tacccgccggcttctcgctccatcatggcgaccaagggccagcggctggtgctggagtgt
gtggccagcggcatccccacccctcaggtgacatgggcgaaggacgggcaggacctgcgc
tacgtcaacaacacccgcttcctgctcagcaacctgctgatcgacgccgtgggtgagagc
gactcgggcacctacgcctgccaggccgacaacggcatccttgcatccgcctctgcgatg
gtgctctataacgtccaggtgtccgagcctccccaggtgacggtggagctgcagcaggtg
tacggtgggacggtgcgcttcacctgccaggctcgcggcaaaccggctccctcggtgacg
tggctccacaacgcgcggcccctgtccccgtcgccccgccaccggctgacctccaggatg
ctccgcgtgtccaacgtgggcctccaggacgagggcctgtaccagtgcatggccgagaac
ggcgtgggcagctcgcaggcgtcggctcgcctcatcatagcctcggccgtcgtccccccg
cggggaaagccgccctccatttttctgagtcccgacaaggtgctgcgggagcagcctccg
gtgaggccggggcccggcggcgccatgttgcccctggactgctccgagctgccgggacag
gtcctgcccgcagaagctcccatcatcctcagccagccgcgcacgggcaaggccgactat
tacgagctgacctggaggccccgacacgagcgcggcgttcccgtgctggagtatatgatt
aaatacagaaaggtgggggaccctctggccgagtggacctccagcagtatctccggctcc
ctgcacaagctgaccctggccaagctgcagccagacagcctgtacgaggtggagatggct
gccaagaactgcgccggcttgggacagccggcaatgatgaccttccgaaccggcaaaggt
acatcggagcacctcggtgatgtttcggggaaggttctaagagtgggggcaggtcgtaga
ggaaaaatcgatcctccaaagacccctgcggtcccgtcgccaagcctctctcggtttttt
ttgccctgtgtttcttgtcctgtcccatttcacactgccccccccccccccgcagctccc
gaagcccccgacaagcccacggtctccgcggcgacggagacatcggcgtacgtgacctgg
atcccgcgcggcaaccgcggcttccccatccagtctttccgggtggagtacaagaaagtg
aagaaggccggagaagactgggtgacggcagtggagaacatccccccatcgcgcctctcc
gtggagatcacaggcctggagaaaggtacatcctacaagttccgcgtggtggcggtgaat
gtcatcggttccagtccccccagcgctccttccaaggcctacgcggtggtggttgggaga
acccccgagcggcccgtcgacggcccctacatcacctacaacgaagccatcaatgagacc
agcatcatcctcaaatggacgtacacgcctgtgaacaacacgcccatctacggcttctac
atctactaccgcccgacggacagcgacaacgacagcgactacaagaaggatgtggtggag
ggggacaagtactggcactccatcaccaacctccagcctgagaccgcctacgacatcaag
atgcagagcttcaacgagaagggcgagagcgagttcggcaacgtggtgatcctggaaacc
aaaggtggggctgtcgtgtcgctcgcgcctgggggggtggaggacagaaccgggtgcatt
gattgtatccctccactgcgtctcgctagcccgccccaatcagcccgtcccgtcggagat
cccagattacagtcctggaacccccaaggacggcgtgcctcggcccggcgacctccccta
cttcatagtcgtcattgtcctcggggccttcatcttcatcattgtggccttcatcccctt
ctgtctttggaggacctgggccaagcagaagcaaacatcagacatgtgctttcccgccgt
gccctcccccgtgccatcctgccagtacaccatggtccctctccagggactggccctggt
tggccgctgcccgctggatggtcacatgaccgggccgcacggggtttaccctgtgaatgg
cgagtgcggcatgaatggcaaacctcaccacctgccaggacggcagcaggtaaagaagcg
aagcgctggaaccggcctgtgtggtgggagtggaaagcctcagctgtggtttctccacag
gaggaggcggactgtgacatggagtgtgacaccctgttaccgcagacggtgccaaatgga
catttgccagtttgccattaccccaccagagtcggtgtcctttcctctcctctctctgga
agacgaaggggtcttcaccacgtcctcctcgacggccacaacgccacaatcccaagatac
gattcaggaagtgagcatcctcccaaatga
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