Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024160G001
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Entry
GSTEN00024160G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10858
DNA mismatch repair protein PMS2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03430
Mismatch repair
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSTEN00024160G001
03460 Fanconi anemia pathway
GSTEN00024160G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00024160G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GSTEN00024160G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
GluR_Homer-bdg
Motif
Other DBs
NCBI-ProteinID:
CAG04443
UniProt:
Q4S4I9
LinkDB
All DBs
Position
2
AA seq
866 aa
AA seq
DB search
AGSIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVRLKDCGADLVEVSDN
GKGVEEANFEGLTLKHHTSKLRDFTDLIHVETFGFRGEALSSLCALSHLSVVTCHGSSQV
GTKLVFDHKGHLVLRSPHPRQQGTTVSLQQLFCTLPVRHKEFQRNIKKEYAKMIHILQSY
CIISTGVRITCSNQNGQGKRSTVLSTSGSQSIRDNIGAIFGPKQLQSLLPFQQACPTENV
IEEFGLSGADLPKQLFCITGFVSRGDHGAGRSASDRQFYFINNRPCDPVKVMKLVNEVYH
MYNRHQYPFVALNISVASGKQAASLRVAKRAAGSLFLSVSSLYLSSPVSSECVDVNVTPD
KRQVFLQEEKLLLAALKSSLIHTYEAGVNKISLNFSSLPSAITSASEIGQPAPFRDSRTE
PSAEPEPGSPRISLNLAGFKAAFANQPGSSHGNKSNVAKVSNSGPTQKTLPSFLKAAASP
GVAPAPKTDCSPAGKSALARFRYGSSFSDTDAEEDSKCAVTMATPRPFAPEPSSLEPDAY
RADVKEEITEEVTSCSRSEGAEPQTEQSSVHQESNMVPEAKRARIGDFPVKPESSVSSNP
SDKSTLAVDSPACLQRRMVPLQFSLRELAGKMKRLLDQQAHRAKEDLCYRRFRAKISPGE
NQSAEAELKKEIRKDMFKDMEIIGQFNLGFIIAKLNSDVFIIDQHATDEKYNFEMLQQHT
VLQGQKLIAPQKLHLTAVSENILMENIDIFRKNGFEFQVDEDAQAMERVKLTSLPTSKNW
TFGPADIEELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSLTEMKKLLVHMGE
MEHPWNCPHGRPTMRHLINLDIVSQD
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
gctggatcaataaaggccatagacaagcactcggtgcaccagatctgctctggccaggtg
gtgctgactttggctactgctgtcaaagagctggtggaaaacagcatcgacgcaggggcc
accaatattgacgtccggctgaaggattgtggcgctgacctagtggaagtatcagacaat
ggcaaaggagtagaagaagccaactttgaaggactgacgttaaagcatcacacgtcaaag
ctcagagactttactgatctgatccatgtggagacatttggattcagaggtgaagccctc
agctctttatgtgccctcagccatctgagtgtggtgacctgccacgggtccagccaggtg
gggaccaagctggtgtttgaccacaaaggccacctggtgctgcggtccccccacccccga
cagcaaggcaccacagtgagcctgcagcagctcttctgcacgctgcccgtccgacacaag
gagtttcagcgcaatattaaaaaggaatacgccaagatgatccacatcctgcagtcctac
tgtatcatctctaccggggtgcgtattacctgctccaaccaaaacgggcaggggaagcgg
agcacagttctcagcaccagtggcagccagagcatcagagacaatattggagctatattt
ggaccaaaacagctgcagagtcttctgcctttccagcaagcgtgccccaccgagaatgtt
attgaagaatttggactgagcggtgccgatcttcccaagcagctgttctgcatcacgggg
tttgtgtcgcggggagaccacggtgctgggaggagcgcctcagacaggcagttctatttc
attaacaatcgcccctgcgaccccgtcaaggtaatgaagcttgtgaacgaggtgtatcac
atgtacaacaggcaccagtatccatttgttgccttgaacatctccgtggcctccggtaag
caggccgccagtctccgcgttgcaaaacgtgctgcaggctcactgtttttaagcgtttcc
tctctttatctttcctctcccgtctcttcagagtgtgtggatgtgaatgtaacccctgac
aaacgccaggttttccttcaggaggagaagctgcttctggctgctctgaagagctccctg
atccacacctacgaggccggcgtcaacaagatcagcctgaacttttcttccctccccagc
gccatcacatcggcatctgaaatcggtcaacctgccccgtttcgggacagcaggacggaa
cccagtgcggaaccggagcccgggagcccaagaatctccctaaacttggcgggctttaaa
gctgcctttgctaatcagcctggctcaagtcatgggaacaaatcaaacgtggcaaaggtt
tccaacagcggcccaacacagaagacactaccgtccttcctcaaagcagcagccagcccc
ggggtggcaccagccccaaagaccgactgttctccagcggggaagtcggcgctagctagg
ttcaggtacgggagctcgttcagtgataccgatgccgaggaggacagcaagtgtgccgta
accatggcaacgccacgtcctttcgctccggaaccgagctctttagaacctgatgcctac
agagccgatgtcaaagaagaaatcacagaagaagtgaccagctgcagtcgttctgaagga
gcagagccacagactgagcagagttctgtccaccaggagtctaacatggtcccagaggcc
aagagggcaaggataggggatttccctgtgaagccagagtccagcgtctcctccaaccct
tcagacaaatccaccctggcagtggattctccagcctgcctacagaggaggatggtgcct
ctccagttctccttgcgggagctggctgggaaaatgaagaggttgctggaccagcaggca
cacagggccaaggaggatctgtgctatcggcgattcagggccaaaatcagccctggagaa
aaccagagcgccgaggccgagctcaaaaaagagatccgcaaagacatgtttaaagacatg
gagatcatcggccagtttaacctgggcttcatcatcgccaagctcaactctgacgtcttt
atcatcgaccagcacgccacagatgagaagtacaactttgagatgctgcagcagcacacg
gttcttcaaggccagaagctcatagcccctcagaagcttcacctcaccgccgtcagtgaa
aatatactcatggaaaacattgacattttcaggaagaatggctttgaattccaggtcgac
gaggacgctcaggcgatggagagggtgaaactgacgtccctgccgaccagtaagaactgg
acgtttggacctgccgacatcgaagagctgatcttcatgctgagtgacagcccaggggtc
atgtgtagaccctcccgcgttaggcagatgtttgcctcccgggcatgtcgcaaatctgtg
atgatcggcacagctctgagcctcaccgagatgaagaagctcctggtccacatgggggag
atggagcacccgtggaactgtcctcatggcaggcccaccatgagacacctcatcaacctg
gacatcgtctcacaggactga
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