Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024229G001
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Entry
GSTEN00024229G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSTEN00024229G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00024229G001
Enzymes [BR:
tng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GSTEN00024229G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GSTEN00024229G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CAG04500
LinkDB
All DBs
Position
2
AA seq
319 aa
AA seq
DB search
MAPKKRGAKRRKTQESSESEDTEEQEQRGASRQRRKKYIGAHVSIQGGIWKAVEACTELG
GNCFALFLGSQRTWKRSPMDHGAAARFQELRSLHGIDPAHIVPHGPYLMNCGSPKTDVYE
KSQTLLVDELSRCSLLGLTLYNFHPGSSLGLITTQQCLGKVAGAINHAHRQVPAVVTVLE
NMCGQGATVGGRFSELRGIIDKVRDQSRVGVCLDTCHAFAAGYDLAAEGGVRAMLDEFDQ
EVGLHYLKAVHLNDSKGQLGCNLDRHEDIGKGCIGISAFQDVVNEPRLNNIPLILETPGR
TGFEYEDQIKLLFSLCRKP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaaaaagagaggagccaaaagaaggaaaacccaggaaagttccgagtcggag
gacaccgaggagcaggagcagagaggggccagcaggcagaggaggaagaagtacattgga
gctcacgtcagcatccagggggggatctggaaagctgtggaggcctgcacagagttgggg
ggcaactgttttgccctgttcctgggctcccagcggacctggaaaagatctcctatggac
cacggcgctgcagcccggttccaggagctgcggtccctccacgggatcgacccggcccac
atcgtgccccacggcccctacctgatgaactgtggctctcctaaaacagatgtgtatgag
aagagtcagaccctgctggtggatgagctgagccgctgcagcctcctgggcctcaccctc
tacaacttccacccaggctcctccctgggcctgatcaccactcagcagtgtctgggaaag
gtggcaggagccatcaaccatgcccaccggcaggtccccgccgttgtcacagtgctggag
aacatgtgcggccagggtgccacggtgggcggaaggttctccgagctgaggggcatcata
gacaaagtgagggaccagagcagggtgggggtgtgtctggacacctgccacgccttcgct
gcaggctacgacctggccgctgagggcggagtcagggccatgctggatgagtttgaccag
gaggtggggctccactacctcaaagccgtccatctcaacgactccaaaggacaactaggc
tgcaatctggatcgccacgaagatatcgggaagggctgcatcggaatctccgctttccag
gacgtcgtaaatgagcccagactgaacaacatccctctgatactggagacgcccggaagg
acaggatttgagtacgaagaccagattaaactcctcttttccctctgtaggaaaccatag
DBGET
integrated database retrieval system
