Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024499G001
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Entry
GSTEN00024499G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16669
protocadherin Fat 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00024499G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Cadherin related
GSTEN00024499G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
CAG04694
UniProt:
Q4S3T8
LinkDB
All DBs
Position
20
AA seq
2413 aa
AA seq
DB search
MALAGSSSGRFHFALLLLWTLGRHSTSSQVRQEFQVLEEQPVGTYVGTIETKPSFTYRFS
ESHRLFSINGSSGVISTSAVIDREALQSDVINVVVLSSQPTYPTEVRIVVLDINDNSPVF
PDASIVVSFKEDASSGRQVILDTATDTDIGSNGVDHTTYRIVKGNEQRKFRLDITVNPSG
EGAFLHLVSTGGLDREVTPFYQLLIEVEDKGEPKTFGYLQVNVTIQDINDNPPSFERDLY
QASVLEDAAVGSSILQVTASDGDEAANAEIRYFLDEETPFQIDPKTGTIIIKEGLDYESR
REYSLTIHAVDNGVPSLSGRAEATIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQVGTV
VALLTVSDSDSSAANGNISVSILGGNEQRHFEVHTSPVPNLSLIKVASVLDRERISSYNL
TVSVSDNGKPVARSSFASLVIFVNDINDHPPIFQETEYRVDISEDIPKGSYIKGVSATDG
DSGQNANLRYSLVSGNALGWFSISENSGLVTSAALLDREATSEVVLNISAKDQGLQPRIS
YTKLIINITDVNDQVPTFTQSTFHVSLAEHAPAGTQLLVLSATDGDLGPNGTMRFSFDAE
TPAAAQGRFRLDPLSGRLSTAVELDREEQASYLLHVQVTDGGSPPLRSAGKVNVTLRDVN
DNRPVFYPLQYFANVKENEPSGSYVTTVSATDPDLGRNGTVKYMITAGDAATFHINGNTG
KISTLVPLDREEKTTYQLQVTAADGSGLRSHTPAIVTVSVLDTQDNPPVFSQKGYSFVMF
ENVGVGTVVGTVSATTVDLNTNVSYLITSGDQRGLFAVNSAGQITASSPIDREEQSFHQL
KVVARAGQITGEVSVNITVKDLNDNAPRFIHAVEHVSAVENWSTGHTIFQAKASDPDEGA
NGVVVYSLKQNPRGLFHIHEKHGLITLTGPLEVTASSYEVEVIAEDMGVPKHTSSLVLIV
SVYDVNDNSPVFDQLSYEVLIPESEPVNSRFFKVEATDKDSGFNGEIVYDIAGGNTGDVF
GIFPDGQLYIKAELDREIQERYNLVLVARDRAVEPLSASVNVSVILDDVNDNRPLFNSTN
YVFHFEEEQQRGSLVGRVFAEDKDFGPNSEVRYTFEMPQPNFELNAITGELSSTAQFDRE
SLMRQRGAAVFSFVVVSSDQGLPRPLKDQAKVQVYIQDINDNQPKFTKDVYQASVSESAP
NVTQLLRVSASDVDENKNGLVQYHVAEGNEEGQFMIDSSSGQITLVGKLDYETTSSYSLK
IIAVDGGAEPLSSSCMLSISVLDENDNSPSFPKSSVSVDVLENMRIGELVASVTATDTDS
GPNADITYSITATNNHGTFSISPNTGSIFLVKKLDYETQSVYKLNVSAKDNGRPSRSSSI
PVIIHVRDFNDNPPIFTPGDIFKSIPENLPVATSVMMIVAHDTDADINGQLEYSIVQQVP
RGNHFSIDASTGVLYTNQEVDREFSNLFELTVKATDQAVPLETRRFALKNVTIWVTDQND
NIPTFLSQNALVAEPNIMIGSILTTVVAYDPDEGANGEVEYELVEGDSGTFIMDRYSGDI
RLASQLVPSQLVYSLTVSATDHGTERKTSRTDLTIILQGLDGPVFSQPKYITILKEGQPP
GTNVISLDASSPRGSTSKVEYFIVAVHSGGKAAGRLFTIGRHSGVIQTAAELDREQGSDL
YLVDVYAIESDASQPRTQRAETQNLGGFLDRLDQENRAGSPSAAGWLPSTVRLWKQPVPQ
PQLEGVLPGSLGGTDNVDPFEFLGQIQRLSLGVCTPNNLMEVEITLQDVNDNPPVFPNDI
LDVTIEENVGDGFKIMQLTATDADELPYVSWLLFPSEGPNALVTYTIISGADDSFRIDPE
SGDLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDINDHSPKFSRATYSFDIPE
DTTAGSIVAAILASDSDSGVNGEVTYSLEEDDEDETFLLNPVTGVFNVTRVLDYELQRYY
ILTARAQDGGGQASTVRVYFNVLDVNDNPPVFETTTYSASVSESLPAGSSVVTVVASDAD
DGPNAQLFYRIASGDPQGHFLITKDGNLRTQKALDRETQSFYNLVITVNDLAPPPMTRFT
STAQVSVILLDVNDCPPTFTSQKMTYIQENTPVDTVVLAVHASDSDSGPNSYVEYSLHGP
FSNKFSIGTIDGDVRLVGELDREEISNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTP
SFSQNIYDIEIEENTLTGTDVIQVFATDADEGTNGQIRFSISGSNTDFRIYSVTGMISVA
RQLDREARSSYSLLVQATDRGSSPRMDQATVNIVLLDVNDCAPVFELSPYTVRVQENLEN
LPTNVLQVVARDDDQGANGQLSYMLSGGNDDGAFSLSSGGQLRLTQTVDREARGEYILLI
TATDSGTSVLDCS
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcaggtagcagctcaggccgctttcatttcgctctgctgctcttgtggact
ctggggcgacattcaacctccagccaagtccgtcaggagtttcaggtgctggaggagcag
cccgtcggcacctacgtgggcacgatagagaccaagcccagcttcacgtaccgcttcagc
gagagccacagactgttctccatcaacggcagcagcggggtcatctccacctccgcggtg
atcgacagggaggctctgcagagcgatgtcatcaacgtggtggtcttgtccagccagccc
acctaccccaccgaggtccggatcgtagttctggatattaacgacaactcccccgtgttt
ccagacgcgtccatcgtcgtgtcctttaaggaggacgccagcagcggcaggcaggtgatc
ctggacaccgccacggacacggacatcggcagcaacggggtcgatcacaccacctacaga
atagtgaaaggcaacgagcagaggaagttccgcttggatatcacagtcaaccccagtggg
gagggggctttcctgcaccttgtttccaccggaggcttggacagagaagttacccccttt
tatcagctcctgattgaagtggaggacaaaggagagccgaagacgtttggctacctgcag
gttaacgtcaccatccaggacatcaacgataacccgcccagttttgagcgagacctgtat
caggccagtgttctggaggatgcggctgtgggctccagcatcctgcaggtcacagcctca
gacggggatgaggcggctaatgcggagatcaggtactttttagatgaagagacacctttt
cagattgaccctaagacgggtacgatcatcattaaagagggtttagattacgagagcaga
agggagtactcgctgaccatccacgcggtggataacggcgttccgtccctgtcgggcaga
gccgaggccaccatcaaactcctggacgtgaatgataacgaccctgtggtgaagttcagg
tatttccccaccacgtccaaatttgcctctgtggacgagaacgcccaggtgggaacggtc
gtggcgctgctcaccgtttcagactcggactcgtccgccgccaacggcaacatatcggtt
tcaatcttaggaggcaacgagcagagacactttgaagtgcacacgtcccctgtgcccaat
ctgagtctgatcaaagtggccagtgtgttggaccgggagcggatttcctcgtacaacctg
acggtctccgtgtcggacaacggcaagccggtggccaggtcctcttttgctagcttggtt
atttttgtgaatgacatcaacgatcacccgcccatattccaggagacggagtacagagtg
gacatcagcgaggacataccaaaaggcagctacattaaaggggtctctgcaacagatggc
gactccgggcagaacgccaaccttcgctactcgctggtgtctggaaacgctttaggctgg
ttctccatcagcgagaacagcggcctggttaccagcgccgctctactggacagggaagcc
acatctgaagttgtgctcaacatcagcgccaaagaccagggcctgcagccccggatctcc
tacaccaaactcatcatcaacatcactgacgtgaacgaccaggtgcccacgttcacgcag
agcacgttccacgtctccctggcggagcacgctcccgctggcacccagctgctggtgctc
tccgccaccgacggcgacctggggcccaacggaaccatgcgcttctcctttgacgcggag
acgcccgccgcagcccaggggcggttccgcctggaccctctgtcggggcgcctgagcaca
gctgtggagctggaccgagaggagcaggcctcctacctgctccacgtccaggtgaccgac
ggcggcagccctcctctgcgctctgctgggaaggtcaacgtcacgctgagagacgtcaac
gacaacaggcccgttttctaccctctgcagtatttcgctaacgtaaaggagaacgagccc
tccgggtcttacgtgaccaccgtgtcggccacggacccggatctgggccgaaacggcacc
gtcaaatacatgatcacagctggagacgctgcaacgttccacattaacggcaacacgggg
aaaatcagcacgctggttcccttagacagagaggagaaaaccacctaccagctgcaggtg
acggccgcagatggcagtggcctgcgctcgcacacgcccgccatagtcaccgtgagcgtg
ctggacacgcaggacaacccgcccgtcttcagccagaagggctacagcttcgtcatgttt
gaaaacgtaggcgtggggacggtcgtggggacggtgtcggccaccaccgtagatctgaac
accaatgtgtcctatctgatcacttcaggggatcagagggggctttttgccgtgaacagc
gccggtcagatcaccgcgtccagtccgattgacagagaggagcagagtttccatcagctc
aaagtcgtagccagagctggccagatcaccggagaggtctcggtcaacatcaccgtcaaa
gacctcaatgataacgctcctcgctttattcacgccgtggaacacgtgagcgcggtggag
aactggagcaccggtcacaccattttccaggccaaagcgtccgaccccgacgagggcgcc
aacggcgtggtggtgtacagcctgaagcagaaccccagggggctctttcacatccacgag
aaacacggcctcatcacgctcacaggccccctggaggtcaccgccagctcctacgaggtg
gaggtcatcgccgaagacatgggggtccccaagcacacgtccagcctcgtgctcatcgtc
agcgtttacgacgtgaatgacaactctcctgtgtttgaccagctttcctacgaggtcctc
atcccagagtctgagcctgtcaacagccgcttcttcaaagtggaggccaccgacaaggac
tcaggtttcaacggcgagatcgtgtatgacatcgcgggtggcaacacgggcgatgtgttt
ggaatatttccagatggacagctgtacatcaaagcggagctagaccgagagattcaggag
cgctacaacctggtgctggtggccagagaccgggcagtggagccgctcagcgccagcgtc
aacgtcagcgtcattctggacgacgtgaacgataaccgcccccttttcaacagcaccaac
tacgtgtttcactttgaggaagagcagcagaggggctcgctggtgggccgtgtttttgcg
gaggacaaggacttcgggccgaacagcgaggtcagatacacgtttgagatgccgcagccc
aactttgagctgaacgccatcacaggcgaactgagcagcaccgcccagttcgaccgcgag
tcgctcatgagacagagaggcgccgccgtgttcagcttcgtggtggtttcctcagaccag
ggtctccccagacccctcaaagatcaggccaaggtgcaggtttacatccaagacatcaac
gacaaccagcccaagttcaccaaggacgtttatcaggcctctgtttccgaatcggctccg
aacgtgacgcagctgctgcgagtctcagcctccgacgttgacgagaacaaaaacgggctg
gttcagtatcacgttgccgagggcaatgaggaaggacagtttatgattgacagcagctca
ggacagattacgctagtaggaaagctggactatgagaccacgtcatcctactcgttgaaa
atcatcgccgtggacggcggagctgaacctttgtcctcctcctgcatgctcagcatcagc
gtcctggatgagaacgacaactccccctccttccccaagtcctcagtgtctgtggacgtc
ctggagaacatgaggataggagagctggttgcctcggtgaccgccacggacacagattcg
ggcccgaacgctgacataacctacagcatcacggccacaaacaaccacggcacgttcagc
atcagccccaacaccggcagcatcttcctggttaaaaagctggactatgagacgcagtct
gtctacaagctcaacgtctctgccaaggacaacggcaggccgtcccgctcctcctccatc
cctgtcatcattcacgtgagagactttaatgacaacccccccatcttcacccccggtgac
attttcaagtccattcctgaaaacctccctgttgccacctctgtgatgatgatcgttgct
cacgacaccgacgcagacataaatgggcagctggagtactccattgtccagcaggttcca
cgggggaaccacttcagcattgacgccagcaccggggtcctctacaccaaccaggaagtg
gacagggagttctcaaacctgtttgagctgacggtcaaagccactgaccaggcggttcct
ctggaaacccgacgcttcgccctgaaaaatgtcaccatctgggtgacggaccagaatgat
aacatccccacctttctgtcccagaacgccctcgtggctgaacccaacatcatgatcggc
tccatcctgacaacggtggtagcctacgaccctgatgagggagccaacggggaggtggag
tatgagctggtggagggcgactccggcaccttcatcatggacaggtacagcggagacatc
cgcctggcgtcccagctggtgccgtcccaactggtctacagcctcacggtgtcagccacc
gaccacggcacggagcgcaagacttccaggacggatctgaccatcatcctccaaggcctg
gacgggccagtcttctctcagcccaaatacatcaccatcctcaaggagggccagcctccc
ggcaccaacgtcatttccctggacgcctccagcccgcggggctccacctccaaggtggag
tacttcatcgtggctgtccacagtggcgggaaggcggcgggacgccttttcaccattggc
cgccacagcggagtgatccagacggcggcagagctggaccgagagcaaggctccgacctg
tacctggtggatgtgtatgccatcgagagtgacgccagccagcccaggacgcagcgagcg
gagacccagaaccttggagggttcctggaccgcctggatcaggagaaccgagcaggttca
ccgagcgctgccgggtggcttccttccaccgtccgtctctggaagcagccggttcctcag
cctcagctggagggggtcttgccaggatctctgggtggaacagataacgtagatccgttt
gagtttcttggtcagatccaaagactttctcttggtgtttgcactcccaacaacttaatg
gaggtggaaatcacgctgcaggatgtcaacgacaatccgcctgttttccccaatgacatt
cttgacgtgaccatcgaggagaacgtcggggacggcttcaagataatgcagctaacagcc
acggacgcagacgagcttccttatgtgtcatggcttctgttcccgtctgagggtccaaac
gcgttggtgacctacaccatcatcagcggggcagacgacagcttccggattgaccctgaa
tccggagacctgatcgccaccaagaagctggacagggagcgacgctccaaatactctctg
ctcgtgcgcgcggacgatgggaaacagtcatccgacatgaggctgaacatcaccgtcaag
gacatcaatgaccattcgcccaaattctccagagcgacatactccttcgatattcctgaa
gacacgacggcaggttctattgttgctgcaatcctggctagtgactccgattcaggggtt
aacggtgaggtgacgtactctttggaggaggacgacgaggatgagaccttccttttgaac
ccggtgacgggggtcttcaacgtgacacgagtgctagactacgagttgcagcggtactac
atcctgaccgccagggcccaggatgggggcggccaggccagcacggtgagggtgtacttc
aacgtcctggatgtgaatgacaacccgccagtcttcgagaccaccacctacagcgcgtcg
gtgtccgagagcctcccggccggctccagcgttgtcacagttgtggccagtgacgctgat
gacggcccaaatgctcagctcttctacagaattgcgtctggtgaccctcagggccacttt
ctcatcaccaaggatggtaacctcagaacacagaaagctctggacagggagacccagtcc
ttctacaacctcgtgatcacggtcaatgacctggctccgccccccatgactcgtttcaca
agcaccgcccaggtgtccgtcattctcttggacgtcaatgactgcccgccgactttcact
tctcagaagatgacgtacatccaggagaacacgccggtggacacggtggtattggcggtc
cacgcctcagactctgacagtggccccaacagttatgtggagtactcccttcatggaccc
ttcagtaacaagttcagcatcggaaccatcgatggagatgtcaggctggtgggggaactg
gaccgggaggagatctccaactacacccttacagtagttgctactgataaaggagaacct
cctttgtcttcaacgatggacgtaacaatggtggtccttgacgtcaatgacaacacacct
agcttctcacagaacatctacgacatcgaaatcgaggagaacaccctgaccggaaccgac
gtcatccaggtgtttgccaccgatgcggacgagggcaccaacgggcagatccgcttctcc
atttcaggtagcaacacagacttcaggatttactccgtcaccgggatgatctcagttgcc
aggcagctggaccgcgaggcacgctcctcctactccctgctggtccaggccaccgaccga
ggcagcagccccagaatggaccaggccactgtcaacatcgtgctgctggacgtcaacgac
tgtgcgcctgtctttgagctctctccttacactgttagggttcaggagaacctggagaac
ctgccgaccaacgttctgcaggtggtcgccagggacgatgaccaaggtgccaacggccag
ctcagctacatgctaagcggagggaatgacgatggtgccttcagcctgtcgtccggcggc
cagctcaggctgactcagactgtggaccgcgaggctcgtggcgaatacatcctgctgatc
acagccacagactcaggtacgagtgtacttgactgttcctaa
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integrated database retrieval system
