Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024547G001
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Entry
GSTEN00024547G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K04990
polycystin 2L1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tng03037
]
GSTEN00024547G001
04040 Ion channels [BR:
tng04040
]
GSTEN00024547G001
Cilium and associated proteins [BR:
tng03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
GSTEN00024547G001
Ion channels [BR:
tng04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GSTEN00024547G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_6
EF-hand_1
DUF6377
EF-hand_7
Motif
Other DBs
NCBI-ProteinID:
CAG04723
UniProt:
Q4S3Q9
LinkDB
All DBs
Position
17
AA seq
595 aa
AA seq
DB search
VTYGMTSSSTYYYTKAMTDLFVNTADQSGLTFQSISTMADFWTYAQGPLLDGLYWTKWYN
DQPLTTEDKSFIYYENMLLGVPRMRQIKILNNSCKVHSDFKDEITGCFDVYNDKKEDYFN
FGLINGTAWSYHTEKEIKGSSHWGLLTTYSGAGYYQDLRRTKEESAAILKDLLDNLWLDR
GTRVIFVDFSTYNANINMFCIIRLVVEFPATGGAIPSYQIRTVKLIRYISVWDYFILGCE
VVFCLFIFYYIVEEILELRIHKFSYFRSIWNILDIVVILLAVVAIIFNVFRTIKVDNLLG
KLLEQPDIYADFEFLAFWQTQYNNMNAVNLFFAWIKVFKYISFNKTMTQLSSTLGRCAKD
IVGFAVMFFIVFFAYAQLGYLLFGMEVESFSTFAKCIFTQFRIILGDFDYNAIDRANRVL
GPIYFVTYVFFVFFVLLNMFLAIINDTYTEVKEELSSQKDELQITDIIKQSYVKTIAKLK
SKKEKISDVQKVLRSGSGDIEFKDFKQTLKEMGHADHEISEAFSRFDRDGNQILDEEEQK
RMKSDLEEKKDALSAEINNLGGNYGNHSPVSGNEQRKNWSQTFVDREQFLRWGRF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgacatatggcatgaccagctcaagcacctactactacaccaaagccatgacggacctg
tttgtgaatacagctgatcaaagtgggcttacgtttcagtccattagcaccatggctgat
ttctggacttatgctcagggccccttgctggatggcctctactggactaaatggtacaac
gaccagcccctgaccactgaagacaagtccttcatctactacgagaacatgctgctgggc
gtcccccgaatgaggcagatcaagatcctcaacaactcctgcaaggtccacagcgacttc
aaagatgagatcaccgggtgttttgatgtctacaacgacaaaaaagaggactattttaac
tttggcctcatcaacggcactgcctggagctaccacacggagaaagaaatcaaaggttcc
tctcactggggcttgctgacgacatacagcggagcggggtactatcaagacctgaggaga
accaaagaggagagcgccgccatcctgaaggacctgctggacaacctgtggctggacaga
gggaccagagtcatctttgtcgacttctccacttacaatgccaacatcaacatgttctgt
atcatcagattggtagttgaattcccagcaaccggtggggcaatcccttcctaccagata
aggacggtcaagttaattcgatacatctcagtctgggattatttcatcctcggctgcgag
gtggttttctgtctattcatcttctattacatcgtggaggagatcctcgagctacgtata
cacaagttctcctacttcagaagtatctggaacatactggatattgttgtcatacttctc
gccgttgttgccatcatcttcaatgttttccggacgatcaaagtggacaacttgctcgga
aaattgctggagcaacccgatatctatgccgattttgaatttctggccttttggcaaacg
cagtacaacaacatgaacgcggtgaacctgtttttcgcatggatcaaggttttcaagtac
atcagttttaacaaaaccatgactcagctgtcctccactttaggaagatgcgctaaagat
atcgtgggcttcgccgtcatgttcttcatcgtcttcttcgcctacgcccagcttggatat
ttgctgtttggaatggaagttgaatctttcagtacatttgccaaatgcatcttcacacag
ttcaggatcattctcggggacttcgattacaacgccatcgaccgggccaacagagttctc
ggcccgatctattttgtcacctacgtgttctttgtgttctttgttctactgaacatgttt
ctggccatcataaatgacacatacaccgaggttaaggaggaactgtcgtcccagaaagac
gagctgcagattacagacatcatcaaacagagctacgtgaagaccattgcaaagcttaaa
tcgaaaaaggagaaaatttcagacgttcagaaggtgctgaggtctggatctggagacatc
gaattcaaggactttaaacaaaccctgaaagagatgggacacgcggatcatgaaatttca
gaagccttttccaggtttgatcgtgacgggaaccaaatcctagatgaagaggagcaaaag
aggatgaaaagcgacttggaggaaaagaaagatgctttaagtgctgaaatcaacaatctc
gggggtaattatgggaaccattcgcctgtcagtggcaacgaacagaggaagaactggagt
cagacgtttgtggaccgcgagcagtttctgaggtggggaaggttttag
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