Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024558G001
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Entry
GSTEN00024558G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08734
DNA mismatch repair protein MLH1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03430
Mismatch repair
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GSTEN00024558G001
03460 Fanconi anemia pathway
GSTEN00024558G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00024558G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
GSTEN00024558G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
tRNA_lig_CPD
Lipoprotein_2
Motif
Other DBs
NCBI-ProteinID:
CAG04734
UniProt:
Q4S3P8
LinkDB
All DBs
Position
17
AA seq
816 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKELIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRQKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEVSFSLCTIKKQILTILVRLF
FNPSHSYLQALASISHVAHVTITTKTADAKCAYRASYTDGKPKSPPKPCAGNQGTQILDE
YAIHNSGKGFSVKKQGETLADVRTLPNASVVDNIRGVFGNTVSRELIEIGCEDQKLAFKM
KGYISNANYSVKKCILILFINRTCSWTDSGLLDRLVESSALKKAIESVYAAYLPKNTHPF
LYLSLEIAPQNIDVNVHPTKHEVHFLHEDSVIENVQKHIESKLLGSGSSRTYFTQTLLPG
PSVSVAGEVKASGGGAAAAAGESAERVYAHQMVRTDCRAQKMDAFLRPKEKQLPEPEPAR
PSRAEAGAETESETAESASAAAGDLDDSDMLEAVAEHEEQMGTDAEDGGAQRKRPREEKN
EDEDADLTAAATPRRRVIKLTSVKELRAETCENTHTGYIEGIRFCFFLNSPPHRTRCLNI
FLLFMHVILFPGLQEMLQNHSFVGCINPQWTLIQYRTKLYLLNTTNLSQELFYQILIYDF
GNFGILRLSVRTPPLYDLAMLALDSEGSGWTEEDGPKEGLAQYIVDFLKRKSEMLKDYFS
MEIDQEGNLTGLPLLLDKYTPVMEGLPMFVLRLATEVNWDNEKECFRDFSRECSMFYSIR
KEYILEAEPGEKQVCGNVGIFFFLNLQFDGTLQRGDKYRARRSFQEAEANSWRWKVEHVI
FKAFRTLFSPLKKFSEDGTVLQIANLPDLYKVFERC
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgttattcggaggctcgacgagactgttgtcaaccgcattgccgctggagaa
gttatccagcgtcctgccaacgccgtcaaggaactaatagagaactgtttggacgctaaa
tccaccaacatccaagtgacggtgaaagatggcggacttaagcttctacagattcaggat
aacggcaccggcatcaggcagaaggaagatatggaaatagtttgtgaaaggtttaccacc
agcaaactgcagacgttcgaggacctctcagccattgcaacctatggctttagaggagag
gtgagtttctcactgtgcactattaaaaaacaaattctcaccatcttggttaggttgttt
tttaacccgtcccactcctatttgcaggcccttgctagtataagccatgttgcacatgtg
accattacaactaaaacagctgatgcaaagtgtgcctacagggccagctacactgatgga
aaaccgaagagtccacccaagccatgtgctggcaatcaaggaacacagatcctggatgag
tatgccatccacaactcaggaaagggtttttccgtcaaaaagcaaggagagactttagca
gatgtgaggaccttacccaatgcatctgtggtcgataacatccggggagttttcgggaac
actgtcagcagggagttgattgaaatcggctgcgaggaccagaagcttgctttcaagatg
aaaggctacatctccaacgccaactattcagtgaagaaatgcatcctcatcctcttcatc
aaccgtacgtgttcctggacagactccgggttgctcgatcgcctggtggagtcgagcgcg
ctgaagaaagccatcgagagcgtttatgcggcgtatctccccaagaacacacaccccttt
ctttacctgagtttagagatcgctcctcagaatatagacgtcaacgtccatcccacgaag
cacgaggtccatttcctgcacgaagacagcgtcatcgagaacgtccagaaacacatcgag
agcaaactcctcggctccggttcgtcgcgcacgtacttcactcagactttgcttccgggg
ccgtcggtgtccgtcgccggcgaggtcaaggcctccggcggcggcgcggcggcggcggcg
ggcgagtccgccgagcgagtctacgcgcaccagatggtgaggacggactgtcgagcgcag
aagatggacgctttcctccggcccaaagagaagcagcttcccgagccggaaccagcgcgc
ccgagccgcgcagaggctggggctgagaccgaaagcgagaccgctgaatctgccagcgct
gccgctggcgacctggacgattctgatatgttggaggccgttgccgagcatgaggaacag
atgggaacggacgccgaagacggcggtgcacaaagaaaacgaccccgggaagagaagaac
gaggacgaagacgcggacctcaccgccgcggccacgcccaggagacgagtcataaaactg
accagcgtcaaagagctcagagctgagacgtgcgagaacacacacacaggttatatcgaa
ggcattcgtttttgtttttttttaaattcccctccccaccgtacaagatgcttaaacatt
tttctgctgtttatgcacgtcatcctttttccaggccttcaggaaatgctgcagaaccac
tcgtttgtgggctgcattaacccccagtggactctgatccagtatcgcacgaaactgtac
ctgctgaacaccaccaacctcagccaggagctcttctaccaaatattgatctacgacttt
ggcaactttggcatcttgaggctctcggtaagaacccctccgctttacgacctggccatg
ctggctctggactctgaggggagcggctggaccgaagaagatggtcctaaagaaggtctg
gcccagtacatcgtggatttcctcaagaggaaatcggagatgctgaaggactacttctcc
atggagatcgaccaggaagggaacctaacagggctgccactgctgctggacaaatacacc
cccgtcatggaggggctccccatgtttgttctgcgcctggcgactgaggtgaactgggac
aacgaaaaggagtgtttccgagacttcagcagggagtgtagcatgttctactccatcagg
aaagagtacatcctggaggcagagccaggagagaagcaggtatgcgggaacgtcggaatc
tttttttttttaaaccttcaatttgatggaacattacagagaggtgacaaataccgtgca
cggcgctcttttcaggaggctgaggcgaactcgtggcggtggaaagtagaacacgtcatc
tttaaggctttccggacgctcttcagccctttgaagaagttcagcgaggacggcaccgtg
ctgcagatcgccaacctgcccgatctctataaagttttcgagcggtgttga
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