Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025072G001
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Entry
GSTEN00025072G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03460
Fanconi anemia pathway
tng04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTEN00025072G001
09124 Replication and repair
03460 Fanconi anemia pathway
GSTEN00025072G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tng04121
]
GSTEN00025072G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00025072G001
Enzymes [BR:
tng01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
GSTEN00025072G001
Ubiquitin system [BR:
tng04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
GSTEN00025072G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
GSTEN00025072G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
DUF7741
Motif
Other DBs
NCBI-ProteinID:
CAG05155
UniProt:
Q4S2H7
LinkDB
All DBs
Position
17
AA seq
235 aa
AA seq
DB search
RLLFIDTAFQTLKLDAEDSSGRQHILTVKLKSKHPFEAPDCSADLPIPLLLNWTPQTSLE
QLYGQFLLVLESLTRFWDTLDEIDRKTWILEPEKPCRSDTMRRIAIGSNVSIKVEVDPRH
PEMLPDCCLLGAEHVVTPLRNKLNTNMHLWFLNCPCDLKHLCTPVFAQSFSAECGICYSI
SLWKIPSLIRCVTTLAVAKLSSRSVCTSGCVGFPLADRALMSFLEIVLTAASQLL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
aggctgctcttcatcgacacggcgttccaaacgttaaagctggatgcagaggactcctca
ggacggcagcacatcctcaccgtcaaactcaagtcaaagcatccatttgaagcacccgac
tgctccgccgacctgcccatccctctgcttttaaactggacaccacagacttctctggag
cagctttatggccagttcctcctggttctggaatccctgaccaggttttgggacacgcta
gacgaaatagacagaaagacctggattctggagccagaaaagccctgccggtccgacacc
atgaggcggatcgccattggaagcaacgtgtccatcaaagtggaagtggatcccagacat
ccagagatgctgccggactgttgccttttgggagctgagcatgtggtgacgccattaagg
aataagctcaacaccaatatgcacttgtggtttctgaattgcccatgcgaccttaaacac
ctgtgtacgcctgtgtttgcacagagcttcagcgctgagtgtgggatctgttactcgata
tcgctctggaagattccatccctgatcaggtgtgtaacgaccctcgctgtggccaaactt
tccagcaggtctgtctgtacgagtggctgcgtgggcttccctctagccgacagagcttta
atgtcgtttttggagattgtccttactgcagcaagccaattactgtga
DBGET
integrated database retrieval system
