Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025240G001
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Entry
GSTEN00025240G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K18493
LIM homeobox protein 5
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00025240G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
GSTEN00025240G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
CAG05271
LinkDB
All DBs
Position
undetermined
AA seq
579 aa
AA seq
DB search
MEKGGMAGRTEREADRGAREGDEERKEEKEVVDGVSSWVTWVTGPESGDKGRPEWHYDTL
TDARAMTAHGDGTGRAGRQNGEEAKVYKVKEVSQAIRKDSFQEQKCYYGKATRELTRAST
ADSSSSASTAAKTLFRGCPSPRSAVRLGRSALGVLQVGDMMVHCAGCERPILDRFLLNVL
DRAWHAKCVQCCECSCNLTEKCFSRDGKLYCKMDFFRRFGTKCAGCLQGISPNDLVRKAR
SKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKEDFLSSGAIKEANLNSVSSCTDRSL
SPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNSGTKRRGPRTTIKAKQLETLKAAFVA
TPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRGPRRMRTL
GGRLEDPDILGPGAYGYYGEYQGDYYGPGSNYDFFPHGPPSSQAQSPAESPYILGSGPGG
MEGSGHRPSEDQRFTDMISHAETPSPDPGLPGSLQPVPGEAYGVTPVIALRCPTKARRWE
KALPGEGQTPGAPPTLGVGLLHSGDKWRKRSCISHGGRF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggagggatggcagggaggacagagcgagaggctgacagaggagcgagggaa
ggagatgaggagaggaaagaagagaaagaggtagtggatggggttagttcatgggtcacc
tgggtgacagggcctgaatctggagataagggccgaccagaatggcattacgacaccctg
actgatgccagggcgatgactgcgcacggcgatgggacagggcgtgcagggagacagaat
ggggaggaggcaaaggtgtacaaggtaaaggaggtgagccaggccattcgcaaggacagt
tttcaggagcagaaatgctactacgggaaggccaccagagaactgacaagagccagcacc
gcggatagctcctccagcgcatccaccgcagccaaaacgttgttccgcggttgtcccagt
ccgagaagcgcagtccggttgggaaggtcggccctcggcgtcctgcaggtcggagacatg
atggtccactgtgccgggtgcgagcggcccatcttggaccggttcctcctcaacgtgctg
gacagagcctggcacgccaagtgcgtccagtgctgcgaatgcagctgcaacctcaccgag
aagtgcttctccagggacggaaagctctattgcaaaatggactttttcaggcgttttggc
accaaatgtgcaggctgcctgcagggaatctctcccaacgacctggtccgcaaagcccgc
agcaaagtgttccacctgaactgcttcacctgcatggtgtgcaacaagcagctgtccacg
ggggaggaactctacgtgatagacgaaaacaaatttgtgtgcaaagaagactttctgagc
tccggagccataaaggaagccaacttgaactcagtgtcgtcgtgcacggatcggagttta
tcgccggatctgcaggacccaacgcaggatgacataaaggagacggataattccacgtcg
tccgataaggaaacgaacaatatcgagaacgaggagcagaactcggggaccaagaggcgg
gggccccggaccaccatcaaggccaagcagctggagaccttaaaggccgcgtttgtggcc
acgccgaaacccacccggcacatccgggagcagctggcccaggagacgggactcaacatg
cgggtgatccaggtgtggttccagaacagaaggtccaaagagcgacgaatgaaacagctg
agcgctctcggggcccggcggcacgccttctttaggggtccgaggaggatgaggaccctg
ggggggcgactggaagatccggacattctgggacccggtgcttacggttactacggagaa
taccagggggattactacggacctgggagtaactacgacttcttcccccacggcccccca
tcttcacaggctcagtctccggctgagtctccctacatccttggctcaggacccggaggc
atggagggatcaggccaccgcccttcggaggaccaaaggttcacggacatgatttcccac
gcagagacccccagcccggacccgggcctaccaggctccctgcagcctgttcccggagaa
gcttatggagtaactccagttatagcgctccgatgtcccaccaaggccaggagatgggag
aaagcgctgcctggtgaaggacagaccccaggagctcctcccacccttggcgtcggcctc
cttcattcaggagacaaatggaggaaacgctcctgcatctcccacggaggacgtttttga
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