Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025697G001
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Entry
GSTEN00025697G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06245
laminin, beta 4
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
tng04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00025697G001
04518 Integrin signaling
GSTEN00025697G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00025697G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
CAG05619
LinkDB
All DBs
Position
13
AA seq
1233 aa
AA seq
DB search
CPDGFCNPSLGDLMVGRASQLSASSTCGLDGPENYCIIGYLEEEQKCFTCDSRLPYNRYS
NPNSHLIENVITTFEPERKLKWWQSENGVHRVSIRLDLETVFQFSHLVLKFKSFRPAAML
VERSKDFGQTWKVFRYFAEDCLLHFPSVPNELANSIDDVVCDSRYSGSEPSTDGEVVLKA
LDPVFEIEDPYAYNIQDLITVTNIRINFTRLFTLGDTLLRKRRNPQDKYYYALYDMVVRG
SCFCNGHASQCTPVDQGRGDTFSQPGMVHGRCVCLHNTAGENCERCADFHHDSPWRPGGQ
KAADVCRRCNCHGHSESCHFDLARFEATGGVSGGMCDNCRHGRTGPQCEHCQAKFYQDPQ
RARDHPQACIRCDCDLAGSKGGGLCDPLTGQCLCKDNTEGQRCDRCKYGFFNLQPDDPNG
CQECRCHVSGTVGSCDPVTGGCDCDPLAVGPLCDRCLVGFWGLGNSLFRCSPCDCDLGGA
QSTQCSPEEGQCRCLPNMVGRRCSDPAPGYFLPSLDYFLYEAELAVPLHGGASPSTTDPP
SSPLLNLGISPNCEQYYRQQGYDFKLSNGRIVLVRRTARSARRRRQEQPMGVVLQRGSIP
LEPGHPLQIIPRQRTGGQPVTWTGQGLVRVQDGAGLRFIVDNLPSSMDYQLVIRYEPEAP
SDWDARVEITPVSLGDGRCASEPTGRKALLLPGDSRAAVLDAPVCLNGGGRYFVDVVFDK
QPDGTPSSPLLVDSMGLIPRIESVQDFCSESDIDSFRRFRCVGLAAELSPQESLPESCEG
LISSMSARINNGAVGDYLTPTSDGRIVIHPARHRACRCNAVGALGPSCSKLGGVCDCKPN
VIGRCCDACAPMTFGFGPDGCEACDCDPRGATSELCDQVRGQCSCRLEVTGRRCDHCRTG
YWGFPLCRPCQCNGLSEECDPHTGECWNCRQHAQGPNCDRCEEGYYGDPVSRQPCEPCLC
PDIQGSGRFFATSCHHEPQSLGLTCACREGHEGPSCDRCSPGYYGNLALPGASCELCLCN
NNIDLDDRNACDGVTGECLRCLHNTMGPQCQDCKPGYYGNALERDCKECSCDRRGTKVTQ
CPLGSPCFCDPSTGQCPCRKGVVGVLCDECEDGYWNMDGASGCQPCSCDPANSLSYVWVS
CCVQVTGQCPCLTEFGGQQCDECGENHFGNPDLQCVSCDCNLDGTERPSCDPETGECMCR
KGVTGIFCDECAPGHDSEFPACRECHPCHALWA
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
tgtcccgatggcttctgcaacccgtcgctcggggacctgatggtgggtcgagcctcgcag
ctgtcggcctcgtccacctgcggtctggacggaccggagaactactgcatcatcggatac
ctggaggaggagcagaaatgcttcacctgcgactcccggctgccgtacaatcgctatagc
aaccccaacagccacctgattgagaacgtcatcaccaccttcgagccggagaggaagctg
aagtggtggcagtctgagaacggggttcaccgggtcagcatcaggctggacctggagacc
gtcttccagttcagccacctggtccttaaattcaagagtttccgcccggcggccatgttg
gtggagcgctccaaggactttgggcaaacctggaaggttttccgctactttgcagaagac
tgtctgctccatttcccttcggtgcccaacgagctggccaacagcatcgacgacgtggtc
tgtgacagcagatactccgggtcagaaccgtccacagacggagaggtggtcctgaaggcg
ttagatcccgtctttgagatagaagacccttatgcctacaacatccaagatctgatcacc
gtgacaaacattcgcatcaacttcacgcgtctcttcacgctgggcgacaccctgctgcgg
aagcgcaggaaccctcaggacaaatattactacgccctttacgacatggtggtccgaggc
agctgcttctgcaacggacacgccagccagtgcacgccggtggaccaggggcggggggac
accttcagccagcctggaatggtccacggccggtgtgtgtgtctgcacaacacagctggg
gagaactgtgagaggtgcgcagacttccaccacgactccccctggaggccgggaggacaa
aaggcagctgacgtctgcagaagatgcaactgccacggccactccgagtcgtgccacttt
gacctggctcgattcgaagccacgggcggcgtgagcggcggcatgtgtgacaactgccgc
cacggcaggacggggccccagtgtgagcactgtcaggccaaattctaccaggacccgcag
agagccagggaccacccacaggcatgcatacggtgtgactgtgacctggctggttccaaa
ggcggcggcctgtgcgaccctctgaccggccagtgtctctgcaaagacaacacggagggg
caacgatgcgatcgctgcaaatacggcttcttcaacctgcaacccgatgaccccaacggc
tgccaggagtgtcgctgtcacgtttcgggaaccgtggggtcatgtgacccggtgacagga
ggctgtgattgtgaccctttggccgtcggaccgctgtgtgaccgatgtctggtaggtttt
tggggtttggggaactccttattcaggtgttccccctgtgactgtgatcttggaggagct
cagagcacccagtgttctccagaggaggggcagtgtcgctgtctgcccaacatggtgggc
cggcgctgctccgaccctgcaccaggctacttcctgccctcgctggactactttctgtat
gaagcagagctggctgttcccctccacggcggcgcgtctccttccactacagaccccccg
tcctctcctctgctaaatctgggcatatctccaaactgtgagcagtactaccgacagcaa
ggctacgactttaagttatccaacgggcggattgttctggtccggcggactgcgcgcagc
gcccgccgccggagacaggagcagccaatgggggtcgtcctgcagcgcggcagcatcccc
ctggagccgggtcaccctctgcagatcatcccccgccagaggacaggcggccagccagtc
acctggactggacaagggctggtcagggtgcaggatggggcggggctcaggttcatcgtg
gacaacctcccgtcatcgatggattaccagctggtgatccgctacgagccagaggcgccg
tctgactgggacgctcgggtcgaaatcaccccagtgtctctgggtgacggcaggtgcgcc
agcgagccgacaggacggaaagctctgctcctccctggagactccagagccgccgtcctc
gatgcgcccgtgtgcctgaatggaggcggccgctatttcgtggacgtggtctttgacaag
cagcccgacggcacgcccagctcccccctcctggtggactcgatgggcctgatcccgcgc
atcgagtccgtgcaggacttctgctcagagagcgacattgactccttccgccgcttccgc
tgcgtgggattggctgctgagctcagtccgcaggagtcgctgccagagagctgcgaagga
ctcatcagcagcatgtcagcgcggatcaacaacggggccgttggtgactacctcacaccc
acctcagatggtcggatcgtcatccatcccgcccgtcaccgggcctgcaggtgcaatgcg
gtgggcgcgctgggacccagctgcagcaaactgggcggagtctgcgactgcaagcccaac
gtgatcggccgctgctgcgacgcctgcgccccgatgacgttcggcttcggacccgacggc
tgcgaagcgtgcgactgcgacccccgcggagccacgtccgagttgtgcgaccaggtcaga
ggtcagtgttcgtgtcgtttggaggtgacgggccgacgctgcgaccactgccggaccgga
tactggggcttccccctctgccgaccctgccagtgcaacgggctgtcggaggagtgcgac
ccccacacgggggagtgctggaactgcaggcagcacgcccaggggccaaactgcgacagg
tgtgaggagggttactacggcgaccccgtctccaggcagccctgtgagccctgcctttgc
cccgacattcagggcagcgggcggttttttgccacctcgtgtcaccatgagccgcagtcc
ctcggtctgacctgcgcttgcagggagggacacgaaggacccagctgtgaccgatgcagc
cccggttactatggcaacctggccttgccgggcgctagctgcgagctgtgtctctgcaac
aacaacattgacctggacgaccgaaacgcctgtgacggcgtgacgggagaatgcctccgc
tgcctccacaacaccatgggacctcagtgccaagactgtaaacccggttactacggcaac
gccctggagcgggactgcaaagagtgctcatgtgaccggcgggggaccaaggtgactcag
tgtcctctggggagtccctgtttctgcgacccgtcgacgggacagtgtccctgccggaag
ggcgtggtgggcgtcctctgcgacgagtgcgaggacggatactggaacatggacggagcg
tcgggatgtcagccctgcagctgcgatccggccaactctttgtcctacgtctgggtgtcg
tgttgtgttcaggtgacgggacagtgtccatgtctcaccgagttcggaggacaacagtgt
gacgaatgtggggagaaccactttgggaatccagacctgcagtgtgtctcttgtgactgc
aacctggatgggaccgagcggccgtcgtgcgaccctgaaaccggcgagtgcatgtgtcgg
aagggggtgactgggattttctgcgacgagtgcgctcctgggcacgattccgagttcccg
gcctgcagggaatgccacccctgccacgccctctgggct
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