Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025698G001
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Entry
GSTEN00025698G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05636
laminin, beta 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04510
Focal adhesion
tng04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
GSTEN00025698G001
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
GSTEN00025698G001
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Ortholog
Paralog
GFIT
Motif
Pfam:
LAMININ_IV_B
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
Alanine_zipper
Motif
Other DBs
NCBI-ProteinID:
CAG05620
UniProt:
Q4S162
LinkDB
All DBs
Position
13
AA seq
1873 aa
AA seq
DB search
PELNDLCTEGSCYPATGDLLIGRAHQLSSTSTCGLSRPEPFCIVSHLQEEKKCFVCDSSE
AYEEQTEQAEDLVGSLRTVRARLVLGVEPPGGMENVTVQLNLEAEFHFTHLIMTFKTFRP
AAMVIERSADFGKTWQIYRYFAYDCESSFPSVSHGPMKKVDDVICDSRYSDIEPSTEGEV
IFRVLDPAFHIDDPYSPRIQNMLKITNLRVKFTKLHTLGDNLLDSRIEIKEKYYYAIYDM
VVRGNCFCYGHASECAPIEGAGQVREGMVHGHCMCNHNTKGLNCEQCEDFHHDLPWRPAE
GRNTNACKRCNCNQHSDSCHFDMAVYLASGNVSGGVCDSCLHNTVGNQCEQCRPFYFQHP
ERDIRDPNICEACDCDPAGSLNGGICDRMTDVRAGLIAGQCRCKANVEGERCDRCRDAHY
GLGDHPEGCKGVKTHTTRQTGAKPRPFTSPSPCDRIPACSCSPLGTLPGGNPCDSETGSC
FCKRLVTGRNCDQCVDEHWGLSNDMSGCRPCDCDLGGAINNQCDQVSGQCVCRDHMFGRR
CDQVESGFYFIGLDHYTYEAEDAKFGPGVTVVPRPHPHDRTPTWTGVGLANVPEGAFLEF
SVDNIPFSMEYDVLIRYEPQLPDQWEEVLMTVMRPGPIRADSRCINTVPDDDNQMISLHP
SWRYVVLPRPVCFESGLNYTVRLSLPLYSALSDVQSPYTLIDSIVLMPHCKNLDIFTSSE
GGDSSGGSAWETFQRYRCLENSQSVVKSPMADICRNYIFSISAMLHQGVKECQCDPQGAL
STVCDASGGQCQCRPNVVGRNCDRCAPATFQFGPNGCRGQQPGGPATSVCVCVCVCVTLR
KETCVCSPPCSVRLRPPGLAEFLLRPADGSVPLPSRGVRSAVRPLPAGSLGLPRLPPVLL
QRARRGVRRPHRPLRRLQGPQRRTRLRKVRRVRHPRVNSCVRANTHLCSDVCRCLDGYYG
DPVLGSGDYCRPCMCPDGPGSLRQFAGSCYRGDGSQQATCICDTGYKGARCDECSPGYYG
NPGEAGGQCQPCRCNGNIDVLDPGSCDSRSGECLLCLHHSEGPACESCKLGYYGNATLSD
CRRCVCNALGSDPSACPAPNDCHCERSSGQCRCLPNVIGQHCNQCAANTWNMASGGGCEP
CSCHPDHSYGPSCNEISGQCSCRPGFGGRTCSECRELFWGNPEAECHACDCDPRGTAEPQ
CNKANGRCVCVEGVSGPRCDVCARGYSGTFPDCQRCHQCFAEWDNVIGQLTNQTHRLVNK
VNALKVSGVSGPYRKTMESMEKSLADVRAVLNQNPAAQPLTEIQELLQQATDLMGALSQR
LNQTEQTVLQVDDLDSTARAKLDSVVSDTQKLERTVQELLDQVEFMKNSDIRGASDSIKK
YFLQSQAAEARANASTVEPGSPVETSSDLRRLTEDKMNQTGEEFLLEHTEHAQRLDDLAG
ELQTLDLSEISHKVCGSRASGQDSCSSSPCGGLGCVDPEGQPKCGGEGCDGVVTKAGSSL
RKAQDTEQEITNAMEEVEKLSKMVSEAKVKADEARQSAQDVLMKTNRTKQRVDESNEELR
TLIKQIRDFLTQDAADLESVELVANEVLAMQMPTTPAQLQNLTNEIRQKVDELGDVAAIL
QQSAGDIQEAERLLEQARRANEEATGVRDSAQKVKEALQEARKAQTAASSAIQQASADIQ
STNSLLSSVESETADAELKLNNATQRLQQLEQDVMQLRDQAQNVSQSKEQTDRDADSIRK
IAEEVKKELDTEIKDKYATVEQLISTKAVGVADAKKRAQLLQQEAKELLLKASEKLQQLK
GDATQKGHKGAQNHHHSANDHSLLLCSDVEKSYEDNQRTLEKKAEQLVELEAAVRGLLTE
ISHKVTVYSTCVF
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
ccggagctcaatgatctgtgcacggagggcagctgttacccggcaacaggagacctcctg
attggccgagcacaccaactttcatctacctccacctgtgggctgagccggcccgaaccc
ttctgcatcgttagccacctgcaggaggagaagaagtgctttgtgtgcgattcgtcggag
gcctacgaggagcagacggagcaggctgaagacctggttggcagtctgagaacggtgaga
gcccgcttggtcctgggtgttgaacccccgggaggcatggagaacgtgaccgtccagctg
aacctggaggccgagtttcacttcacacacctgatcatgaccttcaagacgttccgacct
gccgccatggtgatcgagcggtcggccgacttcgggaaaacgtggcagatctaccgctac
tttgcctacgactgcgagtcctccttcccgtctgtttcccatggtccaatgaagaaggtg
gacgatgtcatctgcgactcccgctactcggacatcgagccgtccaccgaaggagaggtg
attttcagggttctggacccagccttccacatcgacgacccctacagccccaggatccag
aacatgctgaagatcaccaacctgcgggtcaagttcaccaaactgcacacgctcggggac
aacctcctggactctcgcatagagatcaaagagaagtattattacgccatctacgacatg
gtggtccggggcaactgcttctgctacggacacgcctccgagtgtgcccccatcgagggg
gcggggcaggtcagggagggcatggttcacggtcactgcatgtgcaaccacaacaccaag
ggcctgaactgtgagcagtgtgaggacttccaccacgatctgccctggaggccagccgag
ggacgcaacaccaatgcctgcaaaaggtgcaactgcaaccagcactcggactcgtgccac
ttcgacatggccgtgtacttggcctcgggaaacgtcagcggaggggtttgcgacagctgc
ctccacaacacggtcggaaaccagtgcgaacagtgccgaccgttttacttccagcatccg
gagagggacatcagagaccccaacatctgcgaggcctgcgactgtgacccggcgggctcg
ctgaacgggggaatctgcgacaggatgacagatgtgcgcgctggcctcattgctggccag
tgccgctgcaaagctaacgtggagggggagcgctgcgaccgctgcagggacgctcattac
gggctcggcgaccaccccgaaggctgcaaaggtgtgaaaacacacacaacgcgtcaaact
ggagcgaaaccccgcccatttacttcaccctctccttgtgaccgtattccagcttgcagc
tgcagtcctctggggacgcttcctggaggaaatccctgcgacagcgagacgggaagctgc
ttctgcaaacgtttggtgaccggacgcaactgtgaccagtgtgtggacgagcactggggc
ctgagcaacgacatgagcggctgccgaccatgtgactgcgatctggggggcgccatcaac
aaccagtgtgaccaggtgagcggtcagtgcgtctgcagggatcacatgttcgggcggcgc
tgcgaccaggtggagtctggattctacttcatcggtctggatcactacacctacgaggcc
gaggatgccaagtttggaccgggagtgactgtcgtccccaggccccacccccatgaccgc
acgcccacctggacaggtgtcggtctggccaatgtcccagagggcgccttcctggagttc
tccgtggacaacatccccttctccatggagtacgacgtcctgatccgctacgagccccag
cttcctgaccaatgggaggaggttctgatgacggtgatgagacctggaccaatcagagca
gacagccgctgcatcaacacggtgcccgacgacgacaaccagatgatctcgcttcacccc
agctggaggtacgtggttcttcccagaccggtttgcttcgagtcgggtctgaactacacc
gtccgcctcagtctgccgctgtactcggccctcagcgacgtccagtccccgtacaccctc
atcgactcgatcgtgctgatgcctcactgcaagaacctggacattttcaccagctcggag
ggaggagactccagcggcggcagcgcctgggagaccttccagcgctaccgctgcttggag
aacagccagagcgtggtcaagtcgccaatggcggacatctgcaggaattacatcttcagc
atctccgccatgctgcaccagggggtcaaagaatgccagtgcgacccccagggcgcgctc
agcaccgtgtgcgacgccagcggcggccagtgtcagtgtcgtcccaacgtggtggggagg
aactgcgaccgctgcgctccggccaccttccagttcggacccaacggatgcagaggtcag
cagccgggcggacccgccaccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgaccctcaga
aaggagacgtgtgtgtgttcccctccctgcagcgtgcgactgcgacccccggggctcgct
gaattccttctgcgaccagctgacgggtcagtgcctctgccttcccggggtgtccgctcg
gcagtgcgaccgctgcctgccgggtcactggggcttccccgcctgccacccgtgcttctg
caacgggcacgccgaggagtgcgacgccctcaccggccgctgcgtcgactgcagggacca
cagcgccggacacgcctgcgaaaggtgaggcgcgtccgccacccacgggtaaactcctgc
gttcgcgccaacacccacctctgctcggatgtgtgcaggtgcctggatggttactatggc
gacccggtcctggggtcaggtgactactgccgcccctgcatgtgtcccgatggccccgga
agcctgcggcagttcgcaggaagctgttaccgcggcgatggctcccagcaggccacctgc
atctgcgacacaggatataaaggtgcccgctgtgatgagtgctcacctggttactacgga
aaccccggagaggcgggcggccagtgtcagccctgtcggtgtaacggcaacatcgacgtg
ttggacccgggctcgtgcgactcccgcagcggcgagtgtctgctctgcctgcaccacagc
gagggtccggcctgcgagagctgcaaactgggttactacggcaacgccacgctcagcgac
tgcagaaggtgtgtttgcaacgccctgggcagtgacccctccgcctgtccagcacccaac
gactgccactgtgagcgcagcagcggtcagtgtcgctgcctgcccaacgtgatcggtcag
cactgcaatcagtgcgcagccaacacgtggaacatggcgagcggcggcggctgcgagcct
tgcagctgccaccccgatcactcctacgggccgtcctgtaacgagatcagcggtcagtgt
tcctgccgacccggcttcgggggccgaacgtgcagcgagtgtcgagagctgttctggggg
aaccccgaggccgagtgtcacgcatgtgactgcgaccctcgggggacggccgagccgcag
tgcaacaaagctaacggccggtgcgtctgcgtggagggggtgtcggggccgcgctgcgac
gtctgcgcccgcggctactcgggaaccttccccgactgccagcgctgccaccagtgcttc
gccgagtgggacaacgtcattggtcagctgaccaaccagacacaccgcctggtcaacaag
gtcaacgcgctcaaggtcagcggggtcagcggaccctacaggaagaccatggagagcatg
gagaagagcctggccgacgtcagagctgttctcaaccagaatcccgccgcacagccgctg
acggagatccaggagctgctgcaacaggccacagatctgatgggagccctgagccagcgg
ctgaaccagaccgagcagacggtgctgcaggtggacgacctggactccactgcacgggct
aaactggactcggtggtgtcggatacgcagaagctggagcgcacggttcaggagctgctg
gatcaggtggagttcatgaagaactctgacatcagaggggcgtcggacagcatcaaaaag
tacttcctccagtcgcaggccgctgaagctcgtgcaaacgcctccaccgttgagcccggc
agccccgtggaaacgtccagcgacctacggcgactcacagaagacaaaatgaaccagact
ggagaggaattcctgctggagcacacggagcatgctcagaggctggacgacctggccgga
gagctccagactctggatctgtcagagatcagccacaaggtctgcggcagtcgggcgtcg
ggtcaggactcgtgctcgtcttctccctgtggaggtctgggctgcgtggatcctgagggt
cagcccaagtgtggaggtgaaggctgcgacggtgtggtgaccaaagccggcagcagctta
aggaaggcccaggacaccgagcaggagatcaccaacgctatggaggaggtggagaaactc
tccaagatggtgtcggaggccaaggtgaaagcagacgaggcgaggcagagcgctcaggac
gtcctgatgaagaccaacagaaccaagcagagagtcgacgagagcaacgaggaactgaga
acgctcatcaagcagatcagggacttcctcacccaggacgccgcggacctggagagcgtg
gagctggtggctaacgaggttctggccatgcagatgcctacaactcctgctcagctgcag
aacctgaccaacgagatacggcagaaagtggacgagctgggagacgtggcggccatttta
cagcagagcgctggcgacatccaggaagcggagaggctgctggagcaagcccgcagagcc
aatgaggaagcaaccggtgtgagggactcggcccagaaagtgaaggaagcgctccaggaa
gctcgcaaagctcagacggcggcgagcagcgccatccagcaggcgtccgccgacatccag
agcaccaacagcctgctgtcctccgtggagtcggagacggccgacgcggagctgaagctg
aacaacgccacgcagaggctgcagcagctggagcaggacgtgatgcagctgagggaccaa
gctcagaacgtctcgcagagcaaagaacagaccgaccgagatgccgacagcattagaaag
atcgccgaggaggtcaagaaggagctcgacactgaaataaaggataaatacgccacagtg
gagcagctgatcagtaccaaggcggtgggcgtggccgacgcaaagaaaagagcccagctt
ctgcaacaggaagctaaagagctgctgctaaaggctagcgagaagcttcagcagctaaaa
ggtgacgccacacaaaaaggtcacaagggtgctcaaaaccaccaccattcagcaaatgac
cattctctcctcctctgttcagatgtggaaaagtcttacgaggacaaccagaggactcta
gaaaagaaagcagagcagctggtggagctggaggcggcggtgagaggtctgctgacggag
atcagccacaaggtgaccgtctacagcacctgcgtcttc
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