Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025929G001
Help
Entry
GSTEN00025929G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tng04131
]
GSTEN00025929G001
Membrane trafficking [BR:
tng04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
GSTEN00025929G001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
PH
CRAL_TRIO_2
Spectrin_6
Spectrin
SH3_1
DUF2130
hSH3
Serpin
SH3_2
PH_10
UreE_C
Motif
Other DBs
NCBI-ProteinID:
CAG05785
UniProt:
Q4S0P7
LinkDB
All DBs
Position
2
AA seq
1108 aa
AA seq
DB search
DEIMQLDSAPLCAADIAPELMRQFAFLSGGRGDNGSPIIVFPEFPTFGDITDREFHNVLT
YLTSVPSLSSTDVGFILGSFPGNLELVLVLRPTTLLQRTLSDIFFKFNKDEVIMLSSIAE
LHSYIDRTQLTEDLGGTQEYCHDKWISHRTAIEGFALMVKKTAQTLQSFGTELAETELPS
EVQATTNLLSTHTDKKDQMKEDLLVALGQGSRLLESINEPVVRDPDHNMNQDELENMATV
QRLLSQLDETERAFDEFWVRHQTKLEQCLQLRHFEHNYSEVRTQLEQVSEKLLTFSEVGI
SPAHADHIFAEHTAYEERVNELLDRAASLAQEGEDLVQKSHYAQDSIQLKCTEISTISED
VRAGLKARREQLLKAMKLHHALERASKWVDDGIYLLASQPVDKCLSHEGAELALQELEGY
LNNAQQNQLSDPSTIWTEYEAVLNPQFKDQVEKVFQKQLSMQDMFDKRRVSLKKLATKQT
RPVQPVAPRPEAFIKSPLSSPGQPSHSSTNTGWARRTRQRRVLSLAVTKEHNRHASLSEE
EENLAVLRRHVMNELLETERAYVEELLCVLQGYASEMDNPAMLPLIPAPLQNKKEVLFGN
MSEIYHFHKRTFLRELEQYTDCPELVGRCFLQRMTDLQIYEKYCHNKPRSESLWRQCSDC
AFFQECQKKLEHKLGLDSYLLKPVQRITKYQLLLKEMLKYSKTCEGADDLQEALASILGI
LKAVNDSMHLIAITGYEGNLSELGKLLMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFL
HEKALLFCKRREENGEGYEKAPSYSFKHSLSMSAVGITENAKGDNKKFEIWCKSREEVYI
VQAPTADVKTTWVNEIRKVLTTQLEACRGIQREHLVKHSNKMSLEAFGTLPKTNIVLQKP
ASRGQRSQDFLPPFKSGQRSFKKPEEKKAEPGSTDAMSSFSPKPTGTDAGPPPLTLSRPQ
WCSTSSVSQTKQRGWNKTSLSLDASEEHEGYSSAEDPLHSDTEDGASKKLCAGKYTVKAD
YEKAGAQELMVKNGETVELIKQEDDGQWLVRNLSTSKEGTMAVANLMSLIGKSKSCQSLT
SSEGSGSGNLSTSSSCSETYTSFSDIKP
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gatgagatcatgcagctggacagcgctccgctctgtgccgctgacatcgccccggagctc
atgaggcagttcgccttcctttcaggagggagaggtgacaacggcagtcccatcattgtg
tttccagagttccccacatttggagacataacagacagggagtttcacaacgtgctgacc
tacctgacgagtgtacccagtttatcctcgacagacgtgggtttcattctgggctccttc
cccgggaacctcgagctggttctggtcctgagacccaccacactcctgcagcggacgctc
tctgatatcttcttcaagtttaacaaggatgaggtgatcatgctgagctccatagcagag
ctacattcctacatcgatcgcacgcagctgacagaggatctgggggggacacaggagtac
tgccacgacaagtggatctcacaccgcactgctattgaaggatttgcactgatggtgaag
aaaacagcacagacgctgcagtcattcgggaccgagctggctgaaactgaactccccagc
gaagtccaggccacaaccaacctgctgagcacacacaccgacaagaaagaccaaatgaag
gaggatttgctggtggctctgggtcagggcagtcggctgttggagagcatcaatgagccg
gttgttcgagaccccgaccacaacatgaaccaggacgaactggagaacatggctacggtt
cagaggctgctgtctcagctggacgagaccgaacgggcttttgatgagttctgggtgagg
catcaaaccaagctggagcagtgtctccagctgcgccactttgagcacaactacagcgag
gtgaggactcagttggaacaggtgtccgagaaacttctgaccttctccgaggtcgggatc
agcccagctcacgctgatcatatcttcgctgagcacaccgcctacgaggagagagttaac
gagttgctggacagagcggcgtcattggcccaggagggcgaggacctggtccagaagtcc
cactatgctcaggactccattcagctcaaatgcacagagatcagcacaatcagtgaagat
gtgagggccggtctgaaggccaggagggagcaacttctcaaagccatgaagctgcatcac
gctttggaacgggcctcaaaatgggtggatgatgggatctacctgctggcgtctcaacca
gtagacaagtgcttatctcacgagggagcagaattggcccttcaggagctggagggttac
ctgaacaacgcacagcagaaccagctctcggaccccagcaccatctggacagaatatgag
gcagttctcaacccgcaattcaaggaccaggtggagaaggttttccagaaacagttatct
atgcaggacatgtttgacaagagaagagtgagtctgaaaaagttggcaaccaaacaaacc
aggccagtccagccagtggccccccgacctgaagccttcatcaaatcccccctgagctcc
cccggtcagccttcacacagcagcacaaacactggttgggcgagaagaacacgtcagaga
cgcgttctgagtttggctgtgacaaaagagcataacagacatgcatctctctcagaggag
gaggagaacctggcggtgctgaggagacacgtcatgaacgagctgctggaaaccgagaga
gcctacgtggaggagctgctctgcgtactccagggctatgcctctgagatggacaacccg
gccatgcttcccctcatccctgcccctctgcagaacaaaaaggaggttctatttggaaac
atgtctgaaatctaccacttccacaagaggacgtttctgagggagctggagcagtacacc
gactgtccagaattggttggaagatgttttctgcagcggatgaccgacctgcagatctat
gagaagtactgtcacaacaagcctcgctcggaaagtctttggaggcagtgttcagactgt
gccttcttccaggaatgtcagaaaaagttggagcacaagctgggcctagactcctatctg
ctgaagcctgttcagaggatcacaaaatatcagctgcttctcaaggaaatgttgaagtac
agcaagacctgtgagggtgctgatgacctgcaggaggcgctggcctccatcttgggcatc
ctcaaggccgtcaacgactccatgcacctcatcgctattacaggatatgagggtaatctg
agcgagctggggaagttactgatgcagggctccttcagtgtctggacggaacacaagaaa
ggccacgctaaggtgaaagatctggcccgtttcaagcccatgcagaggcacctcttcctc
cacgagaaggccctgctcttctgcaagcgcagggaggagaatggagagggctacgagaag
gccccttcctacagcttcaaacactccctgagcatgagcgctgttggaatcacagagaac
gcaaaaggggacaacaagaagtttgaaatatggtgcaagtccagagaggaggtttacatc
gtgcaggcaccaactgcagatgttaaaaccacgtgggtcaacgagatcaggaaggttctg
accactcagctggaagcatgcagaggtatacagagggaacatcttgtcaaacacagtaat
aaaatgagtttagaagcatttgggacccttccaaaaactaacattgttttgcagaagcca
gccagcagaggtcagcggagccaggatttcctccctcctttcaagtctggtcagaggagc
tttaagaagccagaggagaagaaagcagagcccggcagcacagatgccatgtcctcgttc
tcaccgaagcccacaggaacagacgcaggtcctccccccctcaccctgagcaggccccag
tggtgcagcacctctagcgtctcacagacaaagcagagaggctggaacaaaacctcgctg
tccctggatgcgtcagaggagcacgagggctactccagcgccgaggatcctcttcactct
gacacagaagacggcgccagcaagaaactgtgtgctggcaaatacacagtgaaggccgac
tatgagaaggccggtgcacaggagctgatggtgaagaacggggagacggtggagctgatc
aagcaggaggatgatggacagtggctagtgcgcaacttgagcacgtctaaggagggcacg
atggcggtcgctaatctcatgtctctcattggaaaatctaagtcctgccagtcgctcacc
agctcagagggcagcggctctgggaacctgagcacctcgtccagctgcagcgagacctac
acaagcttctctgacatcaagccctga
DBGET
integrated database retrieval system
